WormBase Tree Display for Gene: WBGene00016923
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| WBGene00016923 | SMap | S_parent | Sequence | C54F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54F6.5 | |||||||
| Molecular_name | C54F6.5 | ||||||||
| C54F6.5.1 | |||||||||
| CE48232 | |||||||||
| Other_name | CELE_C54F6.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C54F6.5 | ||||||||
| DB_info | Database | AceView | gene | C54F6.5 | |||||
| 5I7 | |||||||||
| WormQTL | gene | WBGene00016923 | |||||||
| WormFlux | gene | WBGene00016923 | |||||||
| NDB | locus_tag | CELE_C54F6.5 | |||||||
| NCBI | gene | 179137 | |||||||
| RefSeq | protein | NM_072537.4 | |||||||
| TrEMBL | UniProtAcc | O16447 | |||||||
| UniProt_GCRP | UniProtAcc | O16447 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5160 | ||||||||
| Ortholog | WBGene00107817 | Pristionchus pacificus | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00053162 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00107818 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| WBGene00271219 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CSP39.g6993 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| FL83_08316 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00013081 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| WBGene00271796 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in SMB; body wall musculature; dopaminergic neurons; germ line; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-one chemicals including hydrogen sulfide; Mercuric Chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54F6.5 | |||||||
| Corresponding_CDS_history | C54F6.5:wp154 | ||||||||
| C54F6.5:wp236 | |||||||||
| Corresponding_transcript | C54F6.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043167 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011394 | ||||||||
| Expr1147145 | |||||||||
| Expr2001930 | |||||||||
| Expr2020153 | |||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (207) | |||||||||
| Interaction (128) | |||||||||
| Map_info | Positive | Positive_clone | C54F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.769874 | |||||||
| Method | Gene |
