WormBase Tree Display for Gene: WBGene00012545

WBGene00012545 SMap: S_parent: Sequence: Y37D8A
  Identity: Version: 1
    Name: Sequence_name: Y37D8A.3
      Molecular_name: Y37D8A.3
        Y37D8A.3.1
        CE20208
      Other_name: CELE_Y37D8A.3 Accession_evidence: NDB BX284603
      Public_name: Y37D8A.3
    DB_info: Database: AceView gene 3N927
        WormQTL gene WBGene00012545
        WormFlux gene WBGene00012545
        NDB locus_tag CELE_Y37D8A.3
        Panther gene CAEEL|WormBase=WBGene00012545|UniProtKB=Q9XWV1
          family PTHR35572
        NCBI gene 189612
        RefSeq protein NM_067268.10
        TREEFAM TREEFAM_ID TF353007
        TrEMBL UniProtAcc Q9XWV1
        UniProt_GCRP UniProtAcc Q9XWV1
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (133)
    RNASeq_FPKM (74)
    Ortholog: WBGene00100179 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00035892 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055304 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00122461 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226640 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5006 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6883 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g833 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1828 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8157 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g283 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5918 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16375 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g17697 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4940 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00030.g1743 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y37D8A.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18011 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00930.g16862 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21260 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010890 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08229 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g17951 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30291500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g9245 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245407 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00305962 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00262050 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00003249 Caenorhabditis elegans From_analysis: Panther
      WBGene00009626 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011694 Caenorhabditis elegans From_analysis: Panther
      WBGene00013884 Caenorhabditis elegans From_analysis: Panther
      WBGene00012940 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Enriched in several structures, including NSM; arc ant V; cephalic sheath cell; intestine; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on tiling array; RNA-seq; and microarray studies. Is affected by fifteen chemicals including mianserin; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Abnormal cell migration protein 18-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y37D8A.3
    Corresponding_transcript: Y37D8A.3.1
    Other_sequence (19)
    Associated_feature: WBsf659664
      WBsf659665
      WBsf659666
      WBsf994730
      WBsf225934
  Experimental_info: RNAi_result: WBRNAi00007144 Inferred_automatically: RNAi_primary
      WBRNAi00036789 Inferred_automatically: RNAi_primary
      WBRNAi00055885 Inferred_automatically: RNAi_primary
      WBRNAi00055884 Inferred_automatically: RNAi_primary
      WBRNAi00007146 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021962
      Expr1159410
      Expr2007245
      Expr2025476
    Drives_construct: WBCnstr00029913
    Construct_product: WBCnstr00029913
    Microarray_results (19)
    Expression_cluster (169)
  Map_info: Positive: Positive_clone: Y37D8A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 19.0602
  Reference: WBPaper00065331
  Method: Gene