WormBase Tree Display for Sequence: Y37D8A
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| Y37D8A | DNA | Y37D8A | 133099 | ||
|---|---|---|---|---|---|
| SMap | S_child (12) | ||||
| Structure | From | Source | CHROMOSOME_III | ||
| Overlap_right | Y39E4A | 132994 | |||
| Overlap_left | BE10 | ||||
| Clone_left_end | Y39E4 | 132994 | |||
| Y37D8A | 1 | ||||
| Clone_right_end | BE10 | 104 | |||
| Y37D8A | 133099 | ||||
| DB_info | Database | EMBL | NDB_AC | AL032626 | |
| NDB_SV | AL032626.2 | ||||
| Secondary_accession | Z92819 | ||||
| DB_remark | [060419 pad] Sequence updated to reflect 357 bp of genomic sequence that was never submitted to embl of incorporated in the released assembly. | ||||
| Keyword | HTG | ||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | |||
| Origin | From_author | Barlow K | |||
| From_laboratory | HX | ||||
| Date_directory | 981030 | ||||
| Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00000001 | ||||
| Visible | Clone | Y37D8A | |||
| Remark | Transposon Y37D8A.24 converted into an S_Child [020208 kj] | ||||
| Properties | Genomic_canonical | ||||
| Checksum | MD5 | 6767224e0f9b7ef9f8ca43e22e248cec | |||
| Status | Finished | 30 Oct 1998 00:00:00 | |||
| Submitted | 29 Oct 1998 00:00:00 | ||||
| Annotated | 01 Jan 1980 00:00:00 | ||||
| Map | Sequence-III | ||||
| Interpolated_map_position | III | 19.2637 | |||
| Assembly_tags | Finished Left | 1 | 4 | Y37D8A | |
| Clone right end | 101 | 104 | BE10 | ||
| annotation | 131122 | 131124 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [X] Other Add a comment here - The overlapping clone Y111B2 reads GGG at this point. | ||
| 56201 | 56974 | First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. Repeat is flanked by a tandem duplication of the sequence GTACT. | |||
| 86293 | 87083 | First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. Repeat is flanked by a tandem duplication of the sequence ACATT. | |||
| 106343 | 107171 | First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. This copy of the repeat does not have a flanking duplicated sequence.This copy also contains a region which is covered only by one subclone. | |||
| 116311 | 116808 | First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. In this copy the arms are shorter by approximately bp also there is no flanking duplication of sequence. The sequence which gives rise to the shortened version of this repeat is derived from subclones from two yac clones. | |||
| Finished Right | 133094 | 133099 | Y37D8A | ||
| Clone left end | 132999 | 132994 | Y39E4 | ||
| Method | Genomic_canonical |
