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WormBase Tree Display for Gene: WBGene00012538

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Name Class

WBGene00012538SMapS_parentSequenceY37A1B
IdentityVersion2
NameCGC_namesemo-1Person_evidenceWBPerson3185
Sequence_nameY37A1B.5
Molecular_nameY37A1B.5a
Y37A1B.5a.1
CE19075
Y37A1B.5b
CE44562
Y37A1B.5b.1
Y37A1B.5c
Other_nameCELE_Y37A1B.5Accession_evidenceNDBBX284604
Public_namesemo-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
210 Sep 2020 13:52:41WBPerson1983Name_changeCGC_namesemo-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsemo
AlleleWBVar01839235
WBVar01839236
WBVar00052782
WBVar01455305
WBVar01455306
WBVar01498996
WBVar01499925
WBVar01944952
WBVar00957513
WBVar00957514
WBVar00957515
WBVar00957516
WBVar00957517
WBVar00957518
WBVar00957519
WBVar00957520
WBVar00957521
WBVar00957522
WBVar01703006
WBVar01732048
WBVar00957523
WBVar00957524
WBVar01732049
WBVar00957525
WBVar00194524
WBVar01732050
WBVar00194525
WBVar01732051
WBVar00957526
WBVar00194526
WBVar01732052
WBVar00957527
WBVar01732053
WBVar00957528
WBVar00194527
WBVar00957529
WBVar01732054
WBVar00194528
WBVar00957530
WBVar00194529
WBVar01732055
WBVar00957531
WBVar01732056
WBVar00194530
WBVar01732057
WBVar00957532
WBVar00194531
WBVar00957533
WBVar01732058
WBVar00194532
WBVar01732059
WBVar00194533
WBVar00957534
WBVar01732060
WBVar00194534
WBVar00957535
WBVar00194535
WBVar01732061
WBVar01499951
WBVar00957536
WBVar00194536
WBVar01499952
WBVar00957537
WBVar01732062
WBVar00194537
WBVar00957538
WBVar01732063
WBVar00957539
WBVar01732064
WBVar00194538
WBVar00957540
WBVar01732065
WBVar00194539
WBVar00957541
WBVar01732066
WBVar00194541
WBVar00957542
WBVar01732067
WBVar00194542
WBVar00194543
WBVar00957543
WBVar00957544
WBVar00194544
WBVar00194545
WBVar00957545
WBVar00957546
WBVar00957547
WBVar00957548
WBVar00957549
WBVar00957550
WBVar02055879
WBVar00957551
WBVar00957552
WBVar01821455
WBVar01482692
WBVar02021647
WBVar01498340
WBVar02021648
WBVar02021649
WBVar01805818
WBVar02021650
WBVar02021651
WBVar01967949
WBVar01967950
WBVar01967951
WBVar01967952
WBVar01967953
WBVar01967954
WBVar01797003
WBVar02053908
WBVar01797004
WBVar01797005
WBVar02053909
WBVar01797006
WBVar02109161
WBVar01499492
WBVar01499493
WBVar02103829
WBVar00440784
WBVar00440785
WBVar00440786
WBVar00440787
WBVar00440788
WBVar00440789
WBVar00440790
WBVar00440791
WBVar00440792
WBVar01847139
WBVar02042582
WBVar01847140
WBVar00440793
WBVar00440794
WBVar01847141
WBVar00440795
WBVar01847142
WBVar01847143
WBVar01847144
WBVar01500245
WBVar01847145
WBVar01847146
WBVar01847147
WBVar01847148
WBVar01847149
Possibly_affected_byWBVar02157820
StrainWBStrain00001724
RNASeq_FPKM (74)
GO_annotation00104342
00104343
00119630
Ortholog (39)
ParalogWBGene00011249Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnables methanethiol oxidase activity. Expressed in hypodermal cell. Human ortholog(s) of this gene implicated in glaucoma. Is an ortholog of human SELENBP1 (selenium binding protein 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:1686Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10719)
Molecular_infoCorresponding_CDSY37A1B.5a
Y37A1B.5b
Corresponding_transcriptY37A1B.5c
Y37A1B.5a.1
Y37A1B.5b.1
Other_sequence (39)
Associated_featureWBsf1018595
WBsf229475
Experimental_infoRNAi_resultWBRNAi00055856Inferred_automaticallyRNAi_primary
WBRNAi00020206Inferred_automaticallyRNAi_primary
Expr_pattern (11)
Drives_constructWBCnstr00002549
WBCnstr00004373
WBCnstr00019922
WBCnstr00041572
Construct_productWBCnstr00041572
Regulate_expr_clusterWBPaper00058648:Y37A1B.5(RNAi)_downregulated
WBPaper00058648:Y37A1B.5(RNAi)_upregulated
Microarray_results (25)
Expression_clusterWBPaper00029359_1166
WBPaper00029359_1197
WBPaper00029359_1291
WBPaper00029359_1320
WBPaper00029359_1326
WBPaper00029359_1345
WBPaper00029359_1439
WBPaper00029359_1458
WBPaper00029359_1519
WBPaper00029359_1546
WBPaper00029359_1549
WBPaper00029359_1557
WBPaper00029359_1599
WBPaper00029359_1618
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032425:down_in_zfp-1
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038104:DATS_upregulated
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00041071:spe-44_upregulated
WBPaper00041954:ethanol_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044746:aging_downregulated_Day5
WBPaper00044746:aging_downregulated_HeatShock
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045618:fbf-1_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046499:AMPK_regulated
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00046509:lin-35(n745)_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049325:CB4856_vs_N2_DEG
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049920:hyl-2(tm2031)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00049954:BPA_upregulated
WBPaper00050096:P.aeruginosa_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051265:F1_hrde-1(tm1200)_upregulated
WBPaper00051265:F1_morc-1(tm6048)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_downregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053254:hsp-90(RNAi)_downregulated_protein
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053792:Ochrobactrum_downregulated
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00054410:set-9(rw5)_upregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055137:S.maltophilia_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-25(jy9)_downregulated
WBPaper00056039:efa-6(tm3124)_downregulated
WBPaper00056139:gut-microbiota_downregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057288:Cold_downregulated_protein
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00058948:PA14_upregulated
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059253:stearic-acid_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_downregulated_N2
WBPaper00059816:crh-1(n3315)_downrgulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059895:wounding_downregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060278:atp-2(RNAi)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_N2
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00060764:swsn-9(ok1354)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00061007:HB115_downregulated
WBPaper00061007:M.braciatum_downregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Intestine
WBPaper00061340:RIA
WBPaper00061341:28C_48h_downregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061527:dhs-28_22199-acs-14
WBPaper00061818:AFD_enriched_protein
WBPaper00061818:ELKS-1_interacting
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062146:MOG-7-degron_1h_regulated
WBPaper00062184:PA14_downregulated
WBPaper00062293:isp-1(qm150)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062606:rotenone_upregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062715:blmp-1(s71)_upregulated
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064071:NHR-49_interacting
WBPaper00064130:Beta-Amyloid_downregulated_protein
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065749:endu-2(tm4977)_downregulated
WBPaper00065749:Heat-Shock-With-Recovery_downregulated_N2
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:57_1
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4386_cluster_1_5
cgc4489_group_7
WBPaper00025032:cluster_16
WBPaper00025099:NI_specific
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031850:mdt-15(RNAi)_downregulated
WBPaper00032165:differentially_expressed_with_age_medoid_6
WBPaper00032948:StarveUp3
WBPaper00034739:N2lessDR1350
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00035892:KIM5_vs_OP50_Down
WBPaper00035892:Y.pestis_regulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_C
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00037695:WC_5-day
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:Q200_down
WBPaper00041002:HF_11d_0.2mM_Down
WBPaper00041211:RPW-24_Up
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-exposed_24h
WBPaper00042258:DA1877_downregulated_YoungAdult
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00050538:Fasting_upregulated
WBPaper00050538:Fasting_upregulated_cholesterol-dependent
WBPaper00050650:mBmkTX_downregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_N2
WBPaper00053688:E.faecium_downregulated
WBPaper00055435:MUA-AuNP-0.5_downregulated
WBPaper00055435:MUA-AuNP-3_downregulated
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc5767]:cluster_15
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(143_min)
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SET
[cgc5767]:expression_class_SE_pi(83_min)
[cgc6390]:Cluster_C
InteractionWBInteraction000363177
WBInteraction000388085
WBInteraction000519376
WBInteraction000549759
WBInteraction000560231
WBInteraction000574144
WBInteraction000577964
WBInteraction000578682
WBInteraction000580822
Map_infoPositivePositive_cloneY37A1BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV11.2977
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00058648
WBPaper00061889
WBPaper00062590
WBPaper00062649
WBPaper00062864
WBPaper00065026
WBPaper00065721
MethodGene