WormBase Tree Display for Gene: WBGene00012408
expand all nodes | collapse all nodes | view schema
WBGene00012408 | SMap | S_parent | Sequence | Y7A5A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y7A5A.2 | |||||||
Molecular_name | Y7A5A.2 | ||||||||
Y7A5A.2.1 | |||||||||
CE21327 | |||||||||
Other_name | CELE_Y7A5A.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | Y7A5A.2 | ||||||||
DB_info | Database | AceView | gene | XQ390 | |||||
WormQTL | gene | WBGene00012408 | |||||||
WormFlux | gene | WBGene00012408 | |||||||
NDB | locus_tag | CELE_Y7A5A.2 | |||||||
NCBI | gene | 189381 | |||||||
RefSeq | protein | NM_078194.7 | |||||||
TrEMBL | UniProtAcc | Q9XVZ1 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVZ1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOPX171 | ||||||||
Ortholog | WBGene00058692 | Caenorhabditis remanei | From_analysis | OMA | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00153755 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
FL83_01833 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_025496 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrX_pilon.g20798 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including PLM; PVT; intestine; muscle cell; and somatic gonad precursor based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including mianserin; stavudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y7A5A.2 | |||||||
Corresponding_transcript | Y7A5A.2.1 | ||||||||
Associated_feature | WBsf654673 | ||||||||
WBsf1008329 | |||||||||
WBsf1024649 | |||||||||
WBsf238355 | |||||||||
Experimental_info | RNAi_result | WBRNAi00021502 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058535 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037883 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026134 | ||||||||
Expr1161940 | |||||||||
Expr2008450 | |||||||||
Expr2026691 | |||||||||
Drives_construct | WBCnstr00029968 | ||||||||
Construct_product | WBCnstr00029968 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (77) | |||||||||
Interaction | WBInteraction000032339 | ||||||||
WBInteraction000191481 | |||||||||
WBInteraction000199854 | |||||||||
WBInteraction000348749 | |||||||||
WBInteraction000507437 | |||||||||
Map_info | Positive | Positive_clone | Y7A5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 22.9605 | |||||||
Method | Gene |