WormBase Tree Display for Gene: WBGene00012408
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| WBGene00012408 | SMap | S_parent | Sequence | Y7A5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y7A5A.2 | |||||||
| Molecular_name | Y7A5A.2 | ||||||||
| Y7A5A.2.1 | |||||||||
| CE21327 | |||||||||
| Other_name | CELE_Y7A5A.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | Y7A5A.2 | ||||||||
| DB_info | Database | AceView | gene | XQ390 | |||||
| WormQTL | gene | WBGene00012408 | |||||||
| WormFlux | gene | WBGene00012408 | |||||||
| NDB | locus_tag | CELE_Y7A5A.2 | |||||||
| NCBI | gene | 189381 | |||||||
| RefSeq | protein | NM_078194.7 | |||||||
| TrEMBL | UniProtAcc | Q9XVZ1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVZ1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499519 | ||||||||
| WBVar01499710 | |||||||||
| WBVar01942446 | |||||||||
| WBVar02121917 | |||||||||
| WBVar01499562 | |||||||||
| WBVar02122487 | |||||||||
| WBVar00086854 | |||||||||
| WBVar01831050 | |||||||||
| WBVar00086855 | |||||||||
| WBVar02140769 | |||||||||
| WBVar01831051 | |||||||||
| WBVar01831052 | |||||||||
| WBVar01217254 | |||||||||
| WBVar01217255 | |||||||||
| WBVar01217256 | |||||||||
| WBVar01500132 | |||||||||
| WBVar01217257 | |||||||||
| WBVar01217258 | |||||||||
| WBVar02151712 | |||||||||
| WBVar02120896 | |||||||||
| WBVar00603745 | |||||||||
| WBVar01679837 | |||||||||
| WBVar02049243 | |||||||||
| WBVar01499849 | |||||||||
| WBVar00527439 | |||||||||
| WBVar01553844 | |||||||||
| WBVar01826131 | |||||||||
| WBVar01826132 | |||||||||
| WBVar01929163 | |||||||||
| WBVar02121513 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX171 | ||||||||
| Ortholog | WBGene00058692 | Caenorhabditis remanei | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00153755 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| FL83_01833 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_025496 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g20798 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including PLM; PVT; intestine; muscle cell; and somatic gonad precursor based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including mianserin; stavudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y7A5A.2 | |||||||
| Corresponding_transcript | Y7A5A.2.1 | ||||||||
| Associated_feature | WBsf654673 | ||||||||
| WBsf1008329 | |||||||||
| WBsf1024649 | |||||||||
| WBsf238355 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021502 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058535 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037883 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026134 | ||||||||
| Expr1161940 | |||||||||
| Expr2008450 | |||||||||
| Expr2026691 | |||||||||
| Drives_construct | WBCnstr00029968 | ||||||||
| Construct_product | WBCnstr00029968 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000032339 | ||||||||
| WBInteraction000191481 | |||||||||
| WBInteraction000199854 | |||||||||
| WBInteraction000348749 | |||||||||
| WBInteraction000507437 | |||||||||
| Map_info | Positive | Positive_clone | Y7A5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 22.9605 | |||||||
| Method | Gene |
