WormBase Tree Display for Gene: WBGene00012408
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WBGene00012408 | SMap | S_parent | Sequence | Y7A5A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (32) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOPX171 | |||||
Ortholog | WBGene00058692 | Caenorhabditis remanei | From_analysis | OMA | ||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
WBGene00153755 | Caenorhabditis brenneri | From_analysis | OMA | |||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
FL83_01833 | Caenorhabditis latens | From_analysis | WormBase-Compara | |||
GCK72_025496 | Caenorhabditis remanei | From_analysis | WormBase-Compara | |||
chrX_pilon.g20798 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in several structures, including PLM; PVT; intestine; muscle cell; and somatic gonad precursor based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including mianserin; stavudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y7A5A.2 | ||||
Corresponding_transcript | Y7A5A.2.1 | |||||
Associated_feature | WBsf654673 | |||||
WBsf1008329 | ||||||
WBsf1024649 | ||||||
WBsf238355 | ||||||
Experimental_info | RNAi_result | WBRNAi00021502 | Inferred_automatically | RNAi_primary | ||
WBRNAi00058535 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00037883 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1026134 | |||||
Expr1161940 | ||||||
Expr2008450 | ||||||
Expr2026691 | ||||||
Drives_construct | WBCnstr00029968 | |||||
Construct_product | WBCnstr00029968 | |||||
Microarray_results (16) | ||||||
Expression_cluster (77) | ||||||
Interaction | WBInteraction000032339 | |||||
WBInteraction000191481 | ||||||
WBInteraction000199854 | ||||||
WBInteraction000348749 | ||||||
WBInteraction000507437 | ||||||
Map_info | Positive | Positive_clone | Y7A5A | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | 22.9605 | ||||
Method | Gene |