WormBase Tree Display for Gene: WBGene00012290
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| WBGene00012290 | SMap | S_parent | Sequence | W05H12 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | W05H12.2 | ||||||||
| Molecular_name | W05H12.2 | |||||||||
| Other_name | CELE_W05H12.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | W05H12.2 | |||||||||
| DB_info | Database | AceView | gene | 1O0 | ||||||
| WormQTL | gene | WBGene00012290 | ||||||||
| WormFlux | gene | WBGene00012290 | ||||||||
| NDB | locus_tag | CELE_W05H12.2 | ||||||||
| NCBI | gene | 43578490 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 21 Oct 2019 15:24:46 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (18) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00031681 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00142818 | Caenorhabditis brenneri | From_analysis | OMA | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00158691 | Caenorhabditis brenneri | From_analysis | OMA | |||||||
| WBGene00138967 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| WBGene00069060 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00069780 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00003504 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00014220 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00019422 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; head mesodermal cell; neurons; and ventral nerve cord based on tiling array; microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by Psoralens based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | W05H12.2:wp274 | ||||||||
| Corresponding_pseudogene | W05H12.2 | |||||||||
| Associated_feature | WBsf655326 | |||||||||
| WBsf665064 | ||||||||||
| WBsf985863 | ||||||||||
| WBsf985864 | ||||||||||
| WBsf1011071 | ||||||||||
| Experimental_info | Expr_pattern | Expr1022992 | ||||||||
| Expr1035442 | ||||||||||
| Expr1158381 | ||||||||||
| Expr2006808 | ||||||||||
| Expr2025033 | ||||||||||
| Drives_construct | WBCnstr00030022 | |||||||||
| Construct_product | WBCnstr00030022 | |||||||||
| Microarray_results | SMD_W05H12.2 | |||||||||
| GPL8673_W05H12_2P00317 | ||||||||||
| Expression_cluster (76) | ||||||||||
| Map_info | Positive | Positive_clone | W05H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | 19.7445 | ||||||||
| Method | Gene |
