WormBase Tree Display for Gene: WBGene00012290
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WBGene00012290 | SMap | S_parent | Sequence | W05H12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | W05H12.2 | |||||
Molecular_name | W05H12.2 | ||||||
Other_name | CELE_W05H12.2 | Accession_evidence | NDB | BX284601 | |||
Public_name | W05H12.2 | ||||||
DB_info | Database | AceView | gene | 1O0 | |||
WormQTL | gene | WBGene00012290 | |||||
WormFlux | gene | WBGene00012290 | |||||
NDB | locus_tag | CELE_W05H12.2 | |||||
NCBI | gene | 43578490 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Allele (18) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00031681 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
WBGene00142818 | Caenorhabditis brenneri | From_analysis | OMA | ||||
Inparanoid_8 | |||||||
WBGene00158691 | Caenorhabditis brenneri | From_analysis | OMA | ||||
WBGene00138967 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00069060 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00069780 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
Paralog | WBGene00003504 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00014220 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019422 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; head mesodermal cell; neurons; and ventral nerve cord based on tiling array; microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by Psoralens based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | W05H12.2:wp274 | |||||
Corresponding_pseudogene | W05H12.2 | ||||||
Associated_feature | WBsf655326 | ||||||
WBsf665064 | |||||||
WBsf985863 | |||||||
WBsf985864 | |||||||
WBsf1011071 | |||||||
Experimental_info | Expr_pattern | Expr1022992 | |||||
Expr1035442 | |||||||
Expr1158381 | |||||||
Expr2006808 | |||||||
Expr2025033 | |||||||
Drives_construct | WBCnstr00030022 | ||||||
Construct_product | WBCnstr00030022 | ||||||
Microarray_results | SMD_W05H12.2 | ||||||
GPL8673_W05H12_2P00317 | |||||||
Expression_cluster (76) | |||||||
Map_info | Positive | Positive_clone | W05H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | I | 19.7445 | |||||
Method | Gene |