WormBase Tree Display for Gene: WBGene00012184
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| WBGene00012184 | SMap | S_parent | Sequence | W01F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mnr-1 | Paper_evidence | WBPaper00044291 | |||||
| WBPaper00044290 | |||||||||
| Person_evidence | WBPerson1705 | ||||||||
| Sequence_name | W01F3.1 | ||||||||
| Molecular_name | W01F3.1a | ||||||||
| W01F3.1a.1 | |||||||||
| CE26981 | |||||||||
| W01F3.1b | |||||||||
| CE26982 | |||||||||
| W01F3.1b.1 | |||||||||
| Other_name | CELE_W01F3.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mnr-1 | ||||||||
| DB_info | Database | AceView | gene | 5V129 | |||||
| WormQTL | gene | WBGene00012184 | |||||||
| WormFlux | gene | WBGene00012184 | |||||||
| NDB | locus_tag | CELE_W01F3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012184|UniProtKB=O45879 | |||||||
| family | PTHR21184 | ||||||||
| NCBI | gene | 180350 | |||||||
| RefSeq | protein | NM_075589.8 | |||||||
| NM_075590.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF315079 | |||||||
| TrEMBL | UniProtAcc | Q9BI60 | |||||||
| O45879 | |||||||||
| UniProt_GCRP | UniProtAcc | O45879 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Sep 2013 09:36:57 | WBPerson2970 | Name_change | CGC_name | mnr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mnr | ||||||||
| Allele (133) | |||||||||
| Strain | WBStrain00002811 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Involved in neuron development and regulation of cell morphogenesis. Located in extracellular space and plasma membrane. Expressed in ALA; pharynx; and tail neurons. Human ortholog(s) of this gene implicated in colorectal adenocarcinoma. Is an ortholog of human FAM151B (family with sequence similarity 151 member B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050861 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25032) | ||||
| Molecular_info | Corresponding_CDS | W01F3.1a | |||||||
| W01F3.1b | |||||||||
| Corresponding_CDS_history | W01F3.1a:wp46 | ||||||||
| W01F3.1b:wp46 | |||||||||
| Corresponding_transcript | W01F3.1a.1 | ||||||||
| W01F3.1b.1 | |||||||||
| Other_sequence | CRC03850_1 | ||||||||
| CR08364 | |||||||||
| JI169026.1 | |||||||||
| CR01176 | |||||||||
| Dviv_isotig32906 | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019469 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00113582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054528 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1213 | ||||||||
| Chronogram1719 | |||||||||
| Expr6811 | |||||||||
| Expr11330 | |||||||||
| Expr11333 | |||||||||
| Expr14554 | |||||||||
| Expr1026298 | |||||||||
| Expr1158074 | |||||||||
| Expr2013633 | |||||||||
| Expr2031867 | |||||||||
| Drives_construct | WBCnstr00003338 | ||||||||
| WBCnstr00018438 | |||||||||
| WBCnstr00030078 | |||||||||
| WBCnstr00041158 | |||||||||
| Construct_product | WBCnstr00018395 | ||||||||
| WBCnstr00018431 | |||||||||
| WBCnstr00018432 | |||||||||
| WBCnstr00018433 | |||||||||
| WBCnstr00018437 | |||||||||
| WBCnstr00018438 | |||||||||
| WBCnstr00030078 | |||||||||
| WBCnstr00041158 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction | WBInteraction000434264 | ||||||||
| WBInteraction000503267 | |||||||||
| WBInteraction000542998 | |||||||||
| WBInteraction000542999 | |||||||||
| WBInteraction000543027 | |||||||||
| WBInteraction000555492 | |||||||||
| WBInteraction000556215 | |||||||||
| WBInteraction000556221 | |||||||||
| Map_info | Map | V | Position | 25.0304 | |||||
| Positive | Positive_clone | W01F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
