WormBase Tree Display for Gene: WBGene00012184
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WBGene00012184 | SMap | S_parent | Sequence | W01F3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | mnr-1 | Paper_evidence | WBPaper00044291 | |||
WBPaper00044290 | |||||||
Person_evidence | WBPerson1705 | ||||||
Sequence_name | W01F3.1 | ||||||
Molecular_name | W01F3.1a | ||||||
W01F3.1a.1 | |||||||
CE26981 | |||||||
W01F3.1b | |||||||
CE26982 | |||||||
W01F3.1b.1 | |||||||
Other_name | CELE_W01F3.1 | Accession_evidence | NDB | BX284605 | |||
Public_name | mnr-1 | ||||||
DB_info | Database | AceView | gene | 5V129 | |||
WormQTL | gene | WBGene00012184 | |||||
WormFlux | gene | WBGene00012184 | |||||
NDB | locus_tag | CELE_W01F3.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012184|UniProtKB=O45879 | |||||
family | PTHR21184 | ||||||
NCBI | gene | 180350 | |||||
RefSeq | protein | NM_075589.8 | |||||
NM_075590.6 | |||||||
TREEFAM | TREEFAM_ID | TF315079 | |||||
TrEMBL | UniProtAcc | Q9BI60 | |||||
O45879 | |||||||
UniProt_GCRP | UniProtAcc | O45879 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mnr | ||||||
Allele (133) | |||||||
Strain | WBStrain00002811 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Ortholog (37) | |||||||
Structured_description | Automated_description | Involved in neuron development and regulation of cell morphogenesis. Located in extracellular space and plasma membrane. Expressed in ALA; pharynx; and tail neurons. Human ortholog(s) of this gene implicated in colorectal adenocarcinoma. Is an ortholog of human FAM151B (family with sequence similarity 151 member B). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050861 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25032) | ||
Molecular_info | Corresponding_CDS | W01F3.1a | |||||
W01F3.1b | |||||||
Corresponding_CDS_history | W01F3.1a:wp46 | ||||||
W01F3.1b:wp46 | |||||||
Corresponding_transcript | W01F3.1a.1 | ||||||
W01F3.1b.1 | |||||||
Other_sequence | CRC03850_1 | ||||||
CR08364 | |||||||
JI169026.1 | |||||||
CR01176 | |||||||
Dviv_isotig32906 | |||||||
Associated_feature (12) | |||||||
Experimental_info | RNAi_result | WBRNAi00019469 | Inferred_automatically | RNAi_primary | |||
WBRNAi00113582 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054528 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1213 | ||||||
Chronogram1719 | |||||||
Expr6811 | |||||||
Expr11330 | |||||||
Expr11333 | |||||||
Expr14554 | |||||||
Expr1026298 | |||||||
Expr1158074 | |||||||
Expr2013633 | |||||||
Expr2031867 | |||||||
Drives_construct | WBCnstr00003338 | ||||||
WBCnstr00018438 | |||||||
WBCnstr00030078 | |||||||
WBCnstr00041158 | |||||||
Construct_product | WBCnstr00018395 | ||||||
WBCnstr00018431 | |||||||
WBCnstr00018432 | |||||||
WBCnstr00018433 | |||||||
WBCnstr00018437 | |||||||
WBCnstr00018438 | |||||||
WBCnstr00030078 | |||||||
WBCnstr00041158 | |||||||
Microarray_results (30) | |||||||
Expression_cluster (170) | |||||||
Interaction | WBInteraction000434264 | ||||||
WBInteraction000503267 | |||||||
WBInteraction000542998 | |||||||
WBInteraction000542999 | |||||||
WBInteraction000543027 | |||||||
WBInteraction000555492 | |||||||
WBInteraction000556215 | |||||||
WBInteraction000556221 | |||||||
Map_info | Map | V | Position | 25.0304 | |||
Positive | Positive_clone | W01F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (15) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |