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WormBase Tree Display for Gene: WBGene00012179

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Name Class

WBGene00012179SMapS_parentSequenceW01D2
IdentityVersion1
NameSequence_nameW01D2.1
Molecular_nameW01D2.1
W01D2.1.1
CE18312
Other_nameCELE_W01D2.1Accession_evidenceNDBBX284602
Public_nameW01D2.1
DB_infoDatabaseAceViewgene2P101
WormQTLgeneWBGene00012179
WormFluxgeneWBGene00012179
NDBlocus_tagCELE_W01D2.1
PanthergeneCAEEL|WormBase=WBGene00012179|UniProtKB=O62388
familyPTHR10768
NCBIgene175141
RefSeqproteinNM_064671.9
TREEFAMTREEFAM_IDTF300260
TrEMBLUniProtAccO62388
UniProt_GCRPUniProtAccO62388
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01499702
WBVar00018508
WBVar01498435
WBVar00791461
WBVar00385907
WBVar00385908
WBVar01498941
WBVar01548134
WBVar01499314
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (37)
ParalogWBGene00004451Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL37 (ribosomal protein L37).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW01D2.1
Corresponding_transcriptW01D2.1.1
Other_sequence (150)
Associated_featureWBsf654851
WBsf222512
WBsf222513
Experimental_infoRNAi_result (16)
Expr_patternExpr1023247
Expr1035384
Expr1158068
Expr2006668
Expr2024885
Drives_constructWBCnstr00030083
Construct_productWBCnstr00030083
Microarray_results (22)
Expression_clusterWBPaper00032031:DConiospora_downregulated_OligoArray_24h
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037946:LIN-39_interacting
WBPaper00038118:aak-2(gt33)_downregulated
WBPaper00038118:stress_downregulated_N2
WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00048923:Aging_regulated
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050234:lin-28(RNAi)_downregulated
WBPaper00050412:cco-1(RNAi)_downregulated_N2
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00054996:membranous_oraganelle_CE
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055648:germline_expressed
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055897:heat-shock_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00056900:PID-3_interacting
WBPaper00056900:TOFU-6_interacting
WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060908:TEBP-1_interacting
WBPaper00060908:TEBP-2_interacting
WBPaper00061340:M_cell
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061377:MYRF-1_interacting
WBPaper00061377:MYRF-2_interacting
WBPaper00061377:PAN-1_interacting
WBPaper00061390:daf-22(ok693)_ascarosides_downregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061466:nath-10(icb102)_downregulated
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061651:ADA_enriched
WBPaper00061651:CAN_enriched
WBPaper00061651:Distal_tip_cell_enriched
WBPaper00061651:Germline_enriched
WBPaper00061651:I4_enriched
WBPaper00061651:IL2_LR_enriched
WBPaper00061651:M2_enriched
WBPaper00061651:NSM_enriched
WBPaper00061651:PDB_enriched
WBPaper00061651:PVC_enriched
WBPaper00061651:RID_enriched
WBPaper00061651:RIH_enriched
WBPaper00061651:Spermatheca_enriched
WBPaper00061651:URB_enriched
WBPaper00061651:URX_enriched
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062143:PQN-59_interacting
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064163:ZNFX-1_interacting_embryo
WBPaper00064315:mes-3(bn199)_downregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
WBPaper00064727:daf-2(e1370)_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065258:anchor-cell_enriched
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00066085:hda-3(ok1991)_downregulated
WBPaper00066085:sin-3(syb2172)_downregulated
cgc4489_group_1
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_7
WBPaper00035479:daf-16(RNAi)_upregulated
WBPaper00037113:CPF_16C_down-regulated
WBPaper00041606:CE_S.marcescens_regulated
Interaction (168)
Map_infoPositivePositive_cloneW01D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII23.5366
ReferenceWBPaper00038491
WBPaper00055090
MethodGene