WormBase Tree Display for Gene: WBGene00012166
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WBGene00012166 | SMap | S_parent | Sequence | W01A8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | nuo-6 | Paper_evidence | WBPaper00036109 | |||||
Person_evidence | WBPerson364 | ||||||||
Sequence_name | W01A8.4 | ||||||||
Molecular_name | W01A8.4 | ||||||||
W01A8.4.1 | |||||||||
CE32507 | |||||||||
Other_name | ndub-4 | Person_evidence | WBPerson555 | ||||||
CELE_W01A8.4 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | nuo-6 | ||||||||
DB_info | Database | AceView | gene | 1H644 | |||||
WormQTL | gene | WBGene00012166 | |||||||
WormFlux | gene | WBGene00012166 | |||||||
NDB | locus_tag | CELE_W01A8.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012166|UniProtKB=Q23098 | |||||||
family | PTHR15469 | ||||||||
NCBI | gene | 172438 | |||||||
RefSeq | protein | NM_059600.6 | |||||||
TREEFAM | TREEFAM_ID | TF353901 | |||||||
TrEMBL | UniProtAcc | Q23098 | |||||||
UniProt_GCRP | UniProtAcc | Q23098 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 07 Jul 2010 13:18:30 | WBPerson2970 | Name_change | CGC_name | nuo-6 | ||||
3 | 16 Jan 2023 18:37:21 | WBPerson51134 | Name_change | Other_name | ndub-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nuo | ||||||||
Allele (16) | |||||||||
Strain | WBStrain00026676 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00077256 | ||||||||
00077257 | |||||||||
00077258 | |||||||||
00119344 | |||||||||
Ortholog (38) | |||||||||
Structured_description | Concise_description | nuo-6 encodes the C. elegans ortholog of the NDUFB4/B15 subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I). | Paper_evidence | WBPaper00036109 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 25 Mar 2013 00:00:00 | ||||||||
Automated_description | Predicted to be located in membrane and mitochondrion. Predicted to be part of mitochondrial respiratory chain complex I. Expressed in body wall musculature; germ line; gonad; and hypodermis. Is an ortholog of human NDUFB4 (NADH:ubiquinone oxidoreductase subunit B4). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W01A8.4 | |||||||
Corresponding_CDS_history | W01A8.4:wp90 | ||||||||
Corresponding_transcript | W01A8.4.1 | ||||||||
Other_sequence (89) | |||||||||
Associated_feature | WBsf649280 | ||||||||
WBsf219672 | |||||||||
Experimental_info | RNAi_result (28) | ||||||||
Expr_pattern | Expr9086 | ||||||||
Expr1016520 | |||||||||
Expr1035381 | |||||||||
Expr1158040 | |||||||||
Expr2014532 | |||||||||
Expr2032771 | |||||||||
Drives_construct | WBCnstr00013711 | ||||||||
WBCnstr00030096 | |||||||||
Construct_product | WBCnstr00013711 | ||||||||
WBCnstr00030096 | |||||||||
Regulate_expr_cluster | WBPaper00045263:nuo-6(qm200)_downregulated | ||||||||
WBPaper00045263:nuo-6(qm200)_upregulated | |||||||||
WBPaper00045263:ProLongevity-mtROS_downregulated | |||||||||
WBPaper00045263:ProLongevity-mtROS_upregulated | |||||||||
WBPaper00053810:nuo-6(qm200)_downregulated | |||||||||
WBPaper00053810:nuo-6(qm200)_upregulated | |||||||||
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_downregulated | |||||||||
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated | |||||||||
WBPaper00055941:nuo-6(qm200)_downregulated | |||||||||
WBPaper00055941:nuo-6(qm200)_upregulated | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (101) | |||||||||
Interaction (69) | |||||||||
WBProcess | WBbiopr:00000001 | ||||||||
Map_info | Map | I | Position | 1.69904 | Error | 0.003103 | |||
Positive | Positive_clone | W01A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (43) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |