WormBase Tree Display for Gene: WBGene00012164

WBGene00012164 SMap: S_parent: Sequence: W01A8
  Identity: Version: 3
    Name: Sequence_name: W01A8.2
      Molecular_name: W01A8.2a
        W01A8.2a.1
        CE54392
        W01A8.2a.2
        W01A8.2a.3
        W01A8.2b
      Other_name: CELE_W01A8.2 Accession_evidence: NDB BX284601
      Public_name: W01A8.2
    DB_info: Database: AceView gene 1H630
        WormQTL gene WBGene00012164
        WormFlux gene WBGene00012164
        NDB locus_tag CELE_W01A8.2
        Panther gene CAEEL|EnsemblGenome=WBGene00012164|UniProtKB=Q09EE9
          family PTHR13420
        NCBI gene 172436
        RefSeq protein NR_132560.1
            NM_001395782.1
        TrEMBL UniProtAcc Q09EE9
        UniProt_GCRP UniProtAcc Q09EE9
        RNAcentral URSid URS000084E29E
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 07 Jul 2004 16:40:53 WBPerson1847 Event: Changed_class: CDS Transcript
        3 07 Sep 2006 09:09:29 WBPerson1983 Event: Split_into: WBGene00044988
      Split_into: WBGene00044988
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (35)
    RNASeq_FPKM (74)
    GO_annotation: 00055689
    Ortholog (29)
    Paralog: WBGene00013434 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in cytoplasm. Is an ortholog of human C15orf40 (chromosome 15 open reading frame 40). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W01A8.2a
    Corresponding_CDS_history: W01A8.2:wp128
      W01A8.2a:wp281
    Corresponding_transcript: W01A8.2b
      W01A8.2a.1
      W01A8.2a.2
      W01A8.2a.3
    Corresponding_transcript_history: W01A8.2:wp159
    Corresponding_pseudogene_history: W01A8.2:wp164
    Other_sequence: FC550260.1
      Acan_isotig14039
      CBC15668_1
      CJC02673_1
      ACC32464_1
    Associated_feature: WBsf649276
      WBsf649277
      WBsf649278
      WBsf649279
      WBsf663770
      WBsf664395
      WBsf664396
  Experimental_info: RNAi_result: WBRNAi00001411 Inferred_automatically: RNAi_primary
      WBRNAi00036132 Inferred_automatically: RNAi_primary
      WBRNAi00004353 Inferred_automatically: RNAi_primary
      WBRNAi00090557 Inferred_automatically: RNAi_primary
      WBRNAi00054490 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024528
      Expr1158038
      Expr2006653
      Expr2024870
    Drives_construct: WBCnstr00030098
    Construct_product: WBCnstr00030098
    Microarray_results (35)
    Expression_cluster: WBPaper00030922:glycosylated_protein
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_downregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
      WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
      WBPaper00048690:hermaphrodite-Z1-Z4_enriched
      WBPaper00048690:male-Z1-Z4_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00056161:hermaphrodite_enriched_siRNA
      WBPaper00056167:ifo-1(kc2)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:SGP_biased
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00059537:ngn-1(ok2200)_downregulated
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AIA
      WBPaper00061340:F_U
      WBPaper00061340:rect_D
      WBPaper00061340:RMED
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:C46C2.5_15926-W03F11.1
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062520:qui-1(db104)_downregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:0hr_muscle_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_F
      WBPaper00037147:heatshock_upregulated
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040963:Q100_up
      WBPaper00040963:Q200_up
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00041174:environmental
      WBPaper00041174:environmental_prime
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:isp-1(qm150)_downregulated
  Map_info: Positive: Positive_clone: W01A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 1.67809
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene