WormBase Tree Display for Gene: WBGene00011424

WBGene00011424 SMap: S_parent: Sequence: T04B2
  Identity: Version: 2
    Name: CGC_name: dhs-31 Person_evidence: WBPerson651
      Sequence_name: T04B2.6
      Molecular_name: T04B2.6
        T04B2.6.1
        CE44481
      Other_name: CELE_T04B2.6 Accession_evidence: NDB BX284604
      Public_name: dhs-31
    DB_info: Database: AceView gene 4K804
        WormQTL gene WBGene00011424
        WormFlux gene WBGene00011424
        NDB locus_tag CELE_T04B2.6
        Panther gene CAEEL|WormBase=WBGene00011424|UniProtKB=D3KFT5
          family PTHR43544
        NCBI gene 188051
        RefSeq protein NM_001268528.3
        TrEMBL UniProtAcc D3KFT5
        UniProt_GCRP UniProtAcc D3KFT5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 16 Nov 2004 16:20:56 WBPerson625 Name_change: CGC_name: dhs-31
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhs
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00007331
      00007332
    Ortholog: WBGene00073760 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00065627 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00105022 Pristionchus pacificus From_analysis: OMA
      WBGene00108270 Pristionchus pacificus From_analysis: OMA
      WBGene00151528 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00154701 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00134496 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00155179 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00064543 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00095667 Pristionchus pacificus From_analysis: OMA
      WBGene00109209 Pristionchus pacificus From_analysis: OMA
      WBGene00026296 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00271432 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00226276 Brugia malayi From_analysis: WormBase-Compara
      WBGene00230947 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8667 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g18692 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g23933 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g312 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g313 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g314 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g11385 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g5302 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g13061 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g13062 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_05088.g19345 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g14345 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g14346 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14668 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00074.g3407 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00074.g3408 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00074.g3409 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_20962 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014397 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g11545 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g14823 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g15086 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g15088 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g16500 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g20575 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g20576 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g20577 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g20578 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g20579 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g227 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2369 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2387 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2724 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2725 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2727 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g2728 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g6359 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g6414 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g7174 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g8256 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g9581 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g11484 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239294 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00245070 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263407 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264546 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286202 Trichuris muris From_analysis: WormBase-Compara
      WBGene00286203 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001554 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
      FB:FBgn0030026 Drosophila melanogaster From_analysis: OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040912-22 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-237 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-323 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050419-83 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070705-214 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070424-53 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-051113-92 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070112-892 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:1548 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoInspector
      HGNC:1549 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoInspector
      MGI:88284 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoInspector
      MGI:1309992 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoInspector
      MGI:3646098 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoInspector
    Paralog (23)
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity. Predicted to be located in cytoplasm. Expressed in hypodermis; vulB1; vulB2; vulD; and vulva. Is an ortholog of human CBR1 (carbonyl reductase 1) and CBR3 (carbonyl reductase 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T04B2.6
    Corresponding_CDS_history: T04B2.6a:wp243
    Corresponding_transcript: T04B2.6.1
    Other_sequence: MC05345
      MCC05388_1
    Associated_feature: WBsf997540
      WBsf1018038
  Experimental_info: RNAi_result: WBRNAi00052354 Inferred_automatically: RNAi_primary
      WBRNAi00018123 Inferred_automatically: RNAi_primary
      WBRNAi00052355 Inferred_automatically: RNAi_primary
      WBRNAi00035126 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr129
      Expr2358
      Expr12785
      Expr1020675
      Expr1155983
      Expr2010916
      Expr2029155
    Drives_construct: WBCnstr00004681
      WBCnstr00004682
      WBCnstr00015072
      WBCnstr00022870
    Microarray_results (20)
    Expression_cluster (146)
    Interaction: WBInteraction000116188
      WBInteraction000117969
      WBInteraction000119892
      WBInteraction000119903
      WBInteraction000119943
      WBInteraction000120034
      WBInteraction000120519
      WBInteraction000120635
      WBInteraction000122128
      WBInteraction000122414
      WBInteraction000126526
      WBInteraction000126528
      WBInteraction000126620
      WBInteraction000126622
      WBInteraction000126872
      WBInteraction000126998
      WBInteraction000133435
      WBInteraction000138989
      WBInteraction000168574
      WBInteraction000172002
      WBInteraction000172681
      WBInteraction000176717
      WBInteraction000181686
      WBInteraction000183884
      WBInteraction000191664
      WBInteraction000202078
      WBInteraction000205773
      WBInteraction000205898
      WBInteraction000206921
      WBInteraction000217426
      WBInteraction000226947
      WBInteraction000228661
      WBInteraction000232692
      WBInteraction000244947
      WBInteraction000246714
      WBInteraction000247007
      WBInteraction000250588
      WBInteraction000250934
      WBInteraction000257477
      WBInteraction000269658
      WBInteraction000270787
      WBInteraction000277016
      WBInteraction000277960
      WBInteraction000278262
      WBInteraction000278563
      WBInteraction000283391
      WBInteraction000284727
      WBInteraction000292997
      WBInteraction000295826
      WBInteraction000301537
      WBInteraction000302377
      WBInteraction000302880
      WBInteraction000309809
      WBInteraction000322590
      WBInteraction000322604
      WBInteraction000326423
      WBInteraction000329971
      WBInteraction000330623
      WBInteraction000336168
      WBInteraction000336433
      WBInteraction000338353
      WBInteraction000343351
      WBInteraction000344743
      WBInteraction000353745
      WBInteraction000359974
      WBInteraction000363117
      WBInteraction000363601
      WBInteraction000366128
      WBInteraction000368675
      WBInteraction000370994
      WBInteraction000376081
      WBInteraction000377981
      WBInteraction000383186
      WBInteraction000391115
      WBInteraction000391485
      WBInteraction000395292
      WBInteraction000395590
      WBInteraction000397568
      WBInteraction000398480
      WBInteraction000398636
      WBInteraction000403376
      WBInteraction000404408
      WBInteraction000407015
      WBInteraction000410828
      WBInteraction000412184
      WBInteraction000413078
      WBInteraction000417588
      WBInteraction000418772
      WBInteraction000419300
      WBInteraction000421269
      WBInteraction000422229
      WBInteraction000423598
      WBInteraction000430273
      WBInteraction000431199
      WBInteraction000432118
      WBInteraction000432431
      WBInteraction000435351
      WBInteraction000439821
      WBInteraction000442098
      WBInteraction000443986
      WBInteraction000444527
      WBInteraction000446602
      WBInteraction000453848
      WBInteraction000454137
      WBInteraction000454318
      WBInteraction000454393
      WBInteraction000456653
      WBInteraction000456739
      WBInteraction000457692
      WBInteraction000462371
  Map_info: Map: IV Position: 4.46895 Error: 0.000592
    Positive: Positive_clone: T04B2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00013312
    WBPaper00023999
    WBPaper00032452
    WBPaper00038491
    WBPaper00042257
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene