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WormBase Tree Display for Gene: WBGene00109209

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Name Class

WBGene00109209SMapS_parentSequencePPA_ChrX
IdentityVersion3
NameSequence_namePPA19655
Molecular_namePPA19655
PPA19655.1
PP67657
Other_nameGENEPREDICTION_SNAP300000076490
GENEPREDICTION_SNAP300000076492
GENEPREDICTION_SNAP300000076493
UMM-S285-8.61Person_evidenceWBPerson606
Public_namePPA19655
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00109211
324 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00109212
Acquires_mergeWBGene00109211
WBGene00109212
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.06578From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
6.19733From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (165)
Paralog (27)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. Is an ortholog of C. elegans C30G12.2; sdz-8; and C55A6.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA19655
Corresponding_transcriptPPA19655.1
Other_sequence (13)
Experimental_infoMicroarray_resultsGPL14372_Probes_89056
GPL14372_Probes_89058
GPL14372_Probes_89059
GPL14372_Probes_89065
GPL14372_Probes_89066
GPL14372_Probes_89067
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041606:PP_X.nematophila_regulated
MethodGene