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WormBase Tree Display for Gene: WBGene00011424

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Name Class

WBGene00011424SMapS_parentSequenceT04B2
IdentityVersion2
NameCGC_namedhs-31Person_evidenceWBPerson651
Sequence_nameT04B2.6
Molecular_nameT04B2.6
T04B2.6.1
CE44481
Other_nameCELE_T04B2.6Accession_evidenceNDBBX284604
Public_namedhs-31
DB_infoDatabaseAceViewgene4K804
WormQTLgeneWBGene00011424
WormFluxgeneWBGene00011424
NDBlocus_tagCELE_T04B2.6
PanthergeneCAEEL|WormBase=WBGene00011424|UniProtKB=D3KFT5
familyPTHR43544
NCBIgene188051
RefSeqproteinNM_001268528.3
TrEMBLUniProtAccD3KFT5
UniProt_GCRPUniProtAccD3KFT5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
216 Nov 2004 16:20:56WBPerson625Name_changeCGC_namedhs-31
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhs
Allele (19)
RNASeq_FPKM (74)
GO_annotation00007331
00007332
Ortholog (78)
Paralog (23)
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Predicted to be located in cytoplasm. Expressed in hypodermis; vulB1; vulB2; vulD; and vulva. Is an ortholog of human CBR1 (carbonyl reductase 1) and CBR3 (carbonyl reductase 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST04B2.6
Corresponding_CDS_historyT04B2.6a:wp243
Corresponding_transcriptT04B2.6.1
Other_sequenceMC05345
MCC05388_1
Associated_featureWBsf997540
WBsf1018038
Experimental_infoRNAi_resultWBRNAi00052354Inferred_automaticallyRNAi_primary
WBRNAi00018123Inferred_automaticallyRNAi_primary
WBRNAi00052355Inferred_automaticallyRNAi_primary
WBRNAi00035126Inferred_automaticallyRNAi_primary
Expr_patternExpr129
Expr2358
Expr12785
Expr1020675
Expr1155983
Expr2010916
Expr2029155
Drives_constructWBCnstr00004681
WBCnstr00004682
WBCnstr00015072
WBCnstr00022870
Microarray_results (20)
Expression_clusterWBPaper00032031:DConiospora_upregulated_OligoArray_24h
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_adult_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045257:bar-1(ga80)_upregulated
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00051558:fog-2(q71)_regulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_L3
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057196:raga-1(ok386)_upregulated)
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060634:fhod-1(tm2363)_upregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00060921:tph-1(mg280)_downregulated
WBPaper00061527:C32F10.4-D1086.2
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061952:daf-18(nr2037)_downregulated
WBPaper00061952:daf-18(yh1)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062345:bortezomib_30min_downregulated_zip-1(jy13)
WBPaper00062347:blmp-1(tm548)_upregulated
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065823:pmk-1(km25)_downregulated
WBPaper00065841:33_0
WBPaper00065841:33_1
WBPaper00065841:54_0
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
cgc4489_group_17
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00032948:StarveUp2
WBPaper00036286:Pattern_D
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_old
WBPaper00040963:Q200_up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00046083:ogt-1(ok1474)_OP50_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
Interaction (110)
Map_infoMapIVPosition4.46895Error0.000592
PositivePositive_cloneT04B2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00013312
WBPaper00023999
WBPaper00032452
WBPaper00038491
WBPaper00042257
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene