WormBase Tree Display for Gene: WBGene00011414

WBGene00011414 SMap: S_parent: Sequence: T04A8
  Identity: Version: 2
    Name: Sequence_name: T04A8.13
      Molecular_name: T04A8.13
        T04A8.13.1
        CE43013
      Other_name: CELE_T04A8.13 Accession_evidence: NDB BX284603
      Public_name: T04A8.13
    DB_info: Database: AceView gene 3F797
        WormQTL gene WBGene00011414
        WormFlux gene WBGene00011414
        NDB locus_tag CELE_T04A8.13
        NCBI gene 175619
        RefSeq protein NM_065566.5
        TrEMBL UniProtAcc Q22142
        UniProt_GCRP UniProtAcc Q22142
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Aug 2008 14:22:31 WBPerson4025 Event: Split_into: WBGene00119203
      Split_into: WBGene00119203
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (20)
    Strain: WBStrain00002160
    RNASeq_FPKM (74)
    Ortholog: WBGene00037502 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
    Structured_description: Automated_description: Enriched in intestine; neurons; and in male based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Ethanol; allantoin; and Sirolimus based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T04A8.13
    Corresponding_CDS_history: T04A8.13:wp194
    Corresponding_transcript: T04A8.13.1
    Other_sequence (13)
    Associated_feature: WBsf658855
      WBsf992197
      WBsf1014791
      WBsf1014792
      WBsf224786
  Experimental_info: RNAi_result: WBRNAi00062753 Inferred_automatically: RNAi_primary
      WBRNAi00052332 Inferred_automatically: RNAi_primary
      WBRNAi00005050 Inferred_automatically: RNAi_primary
      WBRNAi00001092 Inferred_automatically: RNAi_primary
      WBRNAi00062754 Inferred_automatically: RNAi_primary
      WBRNAi00111242 Inferred_automatically: RNAi_primary
      WBRNAi00018108 Inferred_automatically: RNAi_primary
      WBRNAi00018109 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram384
      Expr1026622
      Expr1155967
      Expr2005796
      Expr2024013
    Drives_construct: WBCnstr00002920
      WBCnstr00030676
    Construct_product: WBCnstr00030676
    Microarray_results: SMD_T04A8.12
      SMD_T04A8.13
      GPL14144_T04A8.13_557-616_0.948_1_A
      GPL19516_CGZ0033031
      GPL21109_T04A8.13
      GPL9450_T04A8.13
      cea2.3.22594
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
      WBPaper00037682:sma-2_sma-4_upregulated
      WBPaper00037950:A-class-motor-neurons_embryo_enriched
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00041954:ethanol_upregulated
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044616:alg-3-4_upregulated_gene
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Spermatogenic
      WBPaper00046805:P-granule-RNAi_upregulated_Set1
      WBPaper00049498:npr-1(ur89)_regulated_2
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050231:male_enriched
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053599:mitosis_vs_meiosis_upregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053664:ins-11(tm1053)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055648:sperm_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_adult
      WBPaper00056169:rrf-3(pk1426)_upregulated_L4
      WBPaper00056290:hsp-6(mg585)_downregulated
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060683:hlh-11(ko1)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061424:Diet_MYb131_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061478:pie-1(ne4433)_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00062156:jmjd-1.2(zr1010)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062193:daf-16(RNAi)_upregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062456:doxycycline_upregulated_CB4856_transcript
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
      WBPaper00064502:spe-44(fx110)_downregulated
      WBPaper00064505:tamoxifen_downregulated
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064728:cpl-1(W32AY35A)_upregulated
      WBPaper00065029:cadmium_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065158:AFD_enriched
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066038:mip-1(how5)_upregulated
      WBPaper00066085:hda-3(ok1991)_upregulated
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      cgc4489_group_15
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00040858:eQTL_regulated_juvenile
      [cgc6390]:mixed_oogenesis-somatic
      [cgc6390]:spermatogenesis-enriched
    Interaction (32)
  Map_info: Positive: Positive_clone: T04A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.8036
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene