WormBase Tree Display for Gene: WBGene00011307

WBGene00011307 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 2
    Name: CGC_name: mpst-7 Person_evidence: WBPerson1852
      Sequence_name: R186.6
      Molecular_name: R186.6
        R186.6.1
        CE40236
      Other_name: CELE_R186.6 Accession_evidence: NDB BX284605
      Public_name: mpst-7
    DB_info: Database: AceView gene 5N438
        WormQTL gene WBGene00011307
        WormFlux gene WBGene00011307
        NDB locus_tag CELE_R186.6
        Panther gene CAEEL|WormBase=WBGene00011307|UniProtKB=G5EEV0
          family PTHR11364
        NCBI gene 187919
        RefSeq protein NM_073841.5
        TREEFAM TREEFAM_ID TF315133
        TrEMBL UniProtAcc G5EEV0
        UniProt_GCRP UniProtAcc G5EEV0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Mar 2011 11:09:17 WBPerson2970 Name_change: CGC_name: mpst-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mpst
    Allele (47)
    RNASeq_FPKM (74)
    GO_annotation: 00016955
      00016956
      00016957
      00118563
    Ortholog: WBGene00059026 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00152944 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135181 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00088499 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00225708 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1140 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4763 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20103 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3116 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23353 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g5776 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18643 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17536 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8229 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8127 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9487 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00220.g7284 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mpst-7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10796 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00409.g10946 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07688 Caenorhabditis latens From_analysis: WormBase-Compara
      Pan_g12346 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50276700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16143 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243594 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257768 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290500 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-030131-9020 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
      HGNC:7223 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:12388 Homo sapiens From_analysis: Inparanoid
            OrthoInspector
            Panther
            SonicParanoid
      MGI:2179733 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
            SonicParanoid
      RGD:3913 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
      RGD:620065 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
    Paralog: WBGene00008409 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010380 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00017387 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00022007 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00022006 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010383 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable thiosulfate sulfurtransferase activity. Predicted to be located in mitochondrion. Is an ortholog of human MPST (mercaptopyruvate sulfurtransferase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R186.6
    Corresponding_CDS_history: R186.6:wp158
    Corresponding_transcript: R186.6.1
    Other_sequence (13)
    Associated_feature: WBsf1001673
      WBsf234751
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1024627
      Expr1155655
      Expr2013678
      Expr2031912
    Drives_construct: WBCnstr00030757
    Construct_product: WBCnstr00030757
    Microarray_results (17)
    Expression_cluster (124)
    Interaction (28)
  Map_info: Map: V Position: 4.75922 Error: 0.003238
    Positive: Positive_clone: R186 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040475
    WBPaper00055090
    WBPaper00059399
    WBPaper00065080
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene