WormBase Tree Display for Gene: WBGene00008409
expand all nodes | collapse all nodes | view schema
| WBGene00008409 | SMap | S_parent | Sequence | D2023 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mpst-1 | Person_evidence | WBPerson1852 | |||||
| Sequence_name | D2023.5 | ||||||||
| Molecular_name | D2023.5 | ||||||||
| D2023.5.1 | |||||||||
| CE09075 | |||||||||
| Other_name | CELE_D2023.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mpst-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Mar 2011 11:09:17 | WBPerson2970 | Name_change | CGC_name | mpst-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mpst | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00032344 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030519 | ||||||||
| 00030520 | |||||||||
| 00030521 | |||||||||
| 00030522 | |||||||||
| 00030523 | |||||||||
| 00116310 | |||||||||
| Contained_in_operon | CEOP5304 | ||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00011307 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00010380 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017387 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022007 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00022006 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010383 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable thiosulfate sulfurtransferase activity. Predicted to be located in mitochondrion. Is an ortholog of human MPST (mercaptopyruvate sulfurtransferase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2023.5 | |||||||
| Corresponding_transcript | D2023.5.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf653156 | ||||||||
| WBsf234587 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00081139 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001606 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043455 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012573 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113622 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113621 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027370 | ||||||||
| Expr1033645 | |||||||||
| Expr1147449 | |||||||||
| Expr2013675 | |||||||||
| Expr2031909 | |||||||||
| Drives_construct | WBCnstr00032987 | ||||||||
| Construct_product | WBCnstr00032987 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (85) | |||||||||
| Map_info | Map | V | Position | 3.3911 | Error | 0.002536 | |||
| Positive | Positive_clone | D2023 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034662 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040475 | |||||||||
| WBPaper00044324 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059856 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
