WormBase Tree Display for Gene: WBGene00011282

WBGene00011282 SMap: S_parent: Sequence: R74
  Identity: Version: 1
    Name: Sequence_name: R74.8
      Molecular_name: R74.8a
        R74.8a.1
        CE35361
        R74.8b
        CE37038
        R74.8b.1
      Other_name: CELE_R74.8 Accession_evidence: NDB BX284603
      Public_name: R74.8
    DB_info: Database: AceView gene 3F297
        WormQTL gene WBGene00011282
        WormFlux gene WBGene00011282
        NDB locus_tag CELE_R74.8
        Panther gene CAEEL|WormBase=WBGene00011282|UniProtKB=O45722
          family PTHR40326
        NCBI gene 175544
        RefSeq protein NM_001027568.7
            NM_001027567.7
        TREEFAM TREEFAM_ID TF317959
        TrEMBL UniProtAcc Q6BEV8
            O45722
        UniProt_GCRP UniProtAcc O45722
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (17)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP3847
    Ortholog (34)
    Paralog: WBGene00022462 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00019787 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022206 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00045212 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in M cell; germ line; germline precursor cell; neurons; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including glp-1; hsf-1; and gld-1 based on microarray; RNA-seq; and proteomic studies. Is affected by nine chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Six-bladed beta-propeller, TolB-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R74.8a
      R74.8b
    Corresponding_CDS_history: R74.8:wp108
    Corresponding_transcript: R74.8a.1
      R74.8b.1
    Other_sequence: CJC05970_1
      Tcir_isotig24415
      CBC07183_1
      Tcir_isotig21400
    Associated_feature: WBsf645072
      WBsf645073
      WBsf658803
      WBsf658804
      WBsf658805
      WBsf658806
      WBsf992059
      WBsf992060
      WBsf224703
      WBsf224704
  Experimental_info: RNAi_result: WBRNAi00017921 Inferred_automatically: RNAi_primary
      WBRNAi00007687 Inferred_automatically: RNAi_primary
      WBRNAi00052056 Inferred_automatically: RNAi_primary
      WBRNAi00034981 Inferred_automatically: RNAi_primary
      WBRNAi00005016 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014121
      Expr1034959
      Expr1155689
      Expr2005686
      Expr2023902
    Drives_construct: WBCnstr00030780
    Construct_product: WBCnstr00030780
    Microarray_results (27)
    Expression_cluster (155)
    SAGE_tag: SAGE:ttgattgttaccggggg Strand: Antisense
      SAGE:ttgattgtta Strand: Antisense
      SAGE:aaatatttgc Strand: Antisense
      SAGE:caccagtttg Strand: Sense
        Unambiguously_mapped
      SAGE:ttgtaacgctgattcat Strand: Antisense
      SAGE:ctgccgcccc Strand: Sense
        Unambiguously_mapped
      SAGE:ctgccgccccaaaacgg Strand: Sense
        Unambiguously_mapped
    Interaction (211)
  Map_info: Positive: Positive_clone: R74 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -3.66927
  Method: Gene