WormBase Tree Display for Gene: WBGene00022462
expand all nodes | collapse all nodes | view schema
| WBGene00022462 | SMap | S_parent | Sequence | Y110A7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y110A7A.15 | |||||||
| Molecular_name | Y110A7A.15a | ||||||||
| Y110A7A.15a.1 | |||||||||
| CE30705 | |||||||||
| Y110A7A.15b | |||||||||
| CE33206 | |||||||||
| Y110A7A.15b.1 | |||||||||
| Other_name | CELE_Y110A7A.15 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y110A7A.15 | ||||||||
| DB_info | Database | AceView | gene | 1F680 | |||||
| WormQTL | gene | WBGene00022462 | |||||||
| WormFlux | gene | WBGene00022462 | |||||||
| NDB | locus_tag | CELE_Y110A7A.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022462|UniProtKB=H2KZ41 | |||||||
| family | PTHR40326 | ||||||||
| NCBI | gene | 172142 | |||||||
| RefSeq | protein | NM_001380082.1 | |||||||
| NM_001383048.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF317959 | |||||||
| TrEMBL | UniProtAcc | Q8IAB5 | |||||||
| H2KZ41 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ41 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00011282 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019787 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022206 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00045212 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; and tail hypodermis based on proteomic; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and rrf-3 based on microarray; RNA-seq; and proteomic studies. Is affected by twelve chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y110A7A.15a | |||||||
| Y110A7A.15b | |||||||||
| Corresponding_transcript | Y110A7A.15a.1 | ||||||||
| Y110A7A.15b.1 | |||||||||
| Other_sequence | CBC02651_1 | ||||||||
| CR00639 | |||||||||
| CRC02748_1 | |||||||||
| CJC01399_1 | |||||||||
| CJC05870_1 | |||||||||
| Associated_feature | WBsf649141 | ||||||||
| WBsf219372 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055316 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1025880 | ||||||||
| Expr1039925 | |||||||||
| Expr1158856 | |||||||||
| Expr2007012 | |||||||||
| Expr2025238 | |||||||||
| Drives_construct | WBCnstr00024222 | ||||||||
| Construct_product | WBCnstr00024222 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | Y110A7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -0.40495 | |||||||
| Method | Gene |
