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WormBase Tree Display for Gene: WBGene00011244

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Name Class

WBGene00011244SMapS_parentSequenceR11D1
IdentityVersion1
NameSequence_nameR11D1.3
Molecular_nameR11D1.3
R11D1.3.1
CE06308
Other_nameCELE_R11D1.3Accession_evidenceNDBBX284605
Public_nameR11D1.3
DB_infoDatabaseAceViewgene5N190
WormQTLgeneWBGene00011244
WormFluxgeneWBGene00011244
NDBlocus_tagCELE_R11D1.3
PanthergeneCAEEL|WormBase=WBGene00011244|UniProtKB=Q21932
familyPTHR36161
NCBIgene187804
RefSeqproteinNM_073773.5
TREEFAMTREEFAM_IDTF316897
TrEMBLUniProtAccQ21932
UniProt_GCRPUniProtAccQ21932
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (11)
StrainWBStrain00033918
RNASeq_FPKM (74)
Ortholog (26)
ParalogWBGene00020155Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020156Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011245Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012612Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019563Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionExpressed in amphid sheath cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR11D1.3
Corresponding_transcriptR11D1.3.1
Other_sequenceCSC01328_1
FD514938.1
Associated_featureWBsf234712
Experimental_infoRNAi_resultWBRNAi00017745Inferred_automaticallyRNAi_primary
WBRNAi00051778Inferred_automaticallyRNAi_primary
WBRNAi00115942Inferred_automaticallyRNAi_primary
WBRNAi00034857Inferred_automaticallyRNAi_primary
Expr_patternChronogram567
Expr12935
Expr1017773
Expr1155442
Expr2005584
Drives_constructWBCnstr00001087
WBCnstr00023149
WBCnstr00030812
Construct_productWBCnstr00030812
Microarray_results (18)
Expression_clusterWBPaper00031040:Cluster_4
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Elbe_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044857:BAR-1_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045571:germline-ablation_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00049489:AMsh-glia_enriched
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00049954:BPA_downregulated
WBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055648:nerve-ring_expressed
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056731:human-amylin_downregulated
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057265:metaformin_downregulated_OP50
WBPaper00057265:metaformin_downregulated_OP50-MR
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059378:lmn-1(Y59C)_upregulated
WBPaper00059421:daf-1(m40)_downregulated
WBPaper00059421:daf-3(mgDf90)_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_upregulated_N2
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00059739:hira-1(gk835598)_downregulated_L4
WBPaper00059739:hira-1(gk835598)_upregulated_L1
WBPaper00059987:Wounding_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00060921:tph-1(mg280)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:HB115_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061081:E.faecalis_downregulated_N2
WBPaper00061081:E.faecalis_downregulated_skpo-1(ok1640)
WBPaper00061274:hypergravity_10xg_downregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061527:nspc-1_614-nspc-10_22525
WBPaper00061590:CGP37157_downregulated
WBPaper00061651:AMsh_enriched
WBPaper00061651:PHsh_enriched
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_downregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064494:postdauer_upregulated_AWA
WBPaper00064602:egl-9(sa307)_downregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064716:paraquat_downregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00064788:ketamine_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065392:Lb.delbrueckii_upregulated
WBPaper00065392:Lb.gasseri_upregulated
WBPaper00065392:Lb.reuteri_upregulated
WBPaper00065392:Lb.rhamnosus_upregulated
WBPaper00065746:eat-2(ad1113)_upregulated
WBPaper00065841:45_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_18
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031184:acrylamide_upregulated
WBPaper00032062:age_regulated_genes
WBPaper00032948:StarveUp3
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_D
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00038462:aging_downregulated
WBPaper00040184:hcf-1up_sir-2.1down_daf-2up
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041207:CE_dauer_up
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042234:xpa-1_upregulated
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045015:acs-3(ft5)_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00050515:nipi-3(fr4)_downregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_L1
Interaction (75)
Map_infoPositivePositive_cloneR11D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV4.61385
MethodGene