WormBase Tree Display for Gene: WBGene00019563
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| WBGene00019563 | SMap | S_parent | Sequence | K09C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K09C6.9 | |||||||
| Molecular_name | K09C6.9 | ||||||||
| K09C6.9.1 | |||||||||
| CE40091 | |||||||||
| Other_name | CELE_K09C6.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | K09C6.9 | ||||||||
| DB_info | Database | AceView | gene | 5B330 | |||||
| WormQTL | gene | WBGene00019563 | |||||||
| WormFlux | gene | WBGene00019563 | |||||||
| NDB | locus_tag | CELE_K09C6.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019563|UniProtKB=O16945 | |||||||
| family | PTHR36161 | ||||||||
| NCBI | gene | 187204 | |||||||
| RefSeq | protein | NM_070942.8 | |||||||
| TREEFAM | TREEFAM_ID | TF316897 | |||||||
| TrEMBL | UniProtAcc | O16945 | |||||||
| UniProt_GCRP | UniProtAcc | O16945 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00011244 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011245 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012612 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020155 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020156 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-one chemicals including nicotinic acid; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09C6.9 | |||||||
| Corresponding_CDS_history | K09C6.9:wp88 | ||||||||
| K09C6.9:wp107 | |||||||||
| K09C6.9:wp156 | |||||||||
| Corresponding_transcript | K09C6.9.1 | ||||||||
| Other_sequence | FD515831.1 | ||||||||
| CRC03554_1 | |||||||||
| CSC01140_1 | |||||||||
| Associated_feature | WBsf999219 | ||||||||
| WBsf999220 | |||||||||
| WBsf1019111 | |||||||||
| WBsf233298 | |||||||||
| WBsf233299 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050399 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034195 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027616 | ||||||||
| Expr1154102 | |||||||||
| Expr2023185 | |||||||||
| Drives_construct | WBCnstr00025765 | ||||||||
| Construct_product | WBCnstr00025765 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction | WBInteraction000342405 | ||||||||
| WBInteraction000440451 | |||||||||
| Map_info | Positive | Positive_clone | K09C6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.9479 | |||||||
| Reference | WBPaper00064543 | ||||||||
| Method | Gene |
