WormBase Tree Display for Gene: WBGene00011078
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| WBGene00011078 | SMap | S_parent | Sequence | R07B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07B1.6 | |||||||
| Molecular_name | R07B1.6a | ||||||||
| R07B1.6a.1 | |||||||||
| CE01632 | |||||||||
| R07B1.6b | |||||||||
| Other_name | CELE_R07B1.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R07B1.6 | ||||||||
| DB_info | Database | AceView | gene | XK485 | |||||
| WormQTL | gene | WBGene00011078 | |||||||
| WormFlux | gene | WBGene00011078 | |||||||
| NDB | locus_tag | CELE_R07B1.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011078|UniProtKB=Q09420 | |||||||
| family | PTHR21629 | ||||||||
| NCBI | gene | 187647 | |||||||
| RefSeq | protein | NM_077253.4 | |||||||
| NR_160850.1 | |||||||||
| SwissProt | UniProtAcc | Q09420 | |||||||
| UniProt_GCRP | UniProtAcc | Q09420 | |||||||
| RNAcentral | URSid | URS0000E60BDF | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX180 | ||||||||
| CEOP2738 | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00011077 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012571 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WBGene00011877 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019306 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012570 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WBGene00016276 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011079 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00138711 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; arc ant V; hyp3; neurons; and socket cell based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including tryptophan; methylmercury hydroxide; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: C6 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07B1.6a | |||||||
| Corresponding_transcript | R07B1.6b | ||||||||
| R07B1.6a.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051415 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017505 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051416 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1155105 | ||||||||
| Expr2005441 | |||||||||
| Expr2023662 | |||||||||
| Drives_construct | WBCnstr00030948 | ||||||||
| Construct_product | WBCnstr00030948 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000306215 | ||||||||
| WBInteraction000348265 | |||||||||
| WBInteraction000432804 | |||||||||
| Map_info | Positive | Positive_clone | R07B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 1.73038 | |||||||
| Method | Gene |
