WormBase Tree Display for Gene: WBGene00011079
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| WBGene00011079 | SMap | S_parent | Sequence | R07B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | R07B1.7 | |||||||
| Molecular_name | R07B1.7 | ||||||||
| R07B1.7.1 | |||||||||
| CE52883 | |||||||||
| Other_name | CELE_R07B1.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R07B1.7 | ||||||||
| DB_info | Database | AceView | gene | XK487 | |||||
| WormQTL | gene | WBGene00011079 | |||||||
| WormFlux | gene | WBGene00011079 | |||||||
| NDB | locus_tag | CELE_R07B1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011079|UniProtKB=Q09421 | |||||||
| family | PTHR21629 | ||||||||
| NCBI | gene | 187648 | |||||||
| RefSeq | protein | NM_077254.4 | |||||||
| SwissProt | UniProtAcc | Q09421 | |||||||
| UniProt_GCRP | UniProtAcc | Q09421 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Sep 2008 10:58:18 | WBPerson1983 | Event | Split_into | WBGene00138711 | ||||
| Split_into | WBGene00138711 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01786889 | ||||||||
| WBVar02069039 | |||||||||
| WBVar01177129 | |||||||||
| WBVar01177130 | |||||||||
| WBVar02139911 | |||||||||
| WBVar01888010 | |||||||||
| WBVar01888011 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX180 | ||||||||
| CEOP2738 | |||||||||
| Ortholog (13) | |||||||||
| Paralog | WBGene00011077 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00011078 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012571 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011877 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019306 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012570 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016276 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00138711 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; and coelomocyte based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including methylmercury hydroxide; multi-walled carbon nanotube; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: C6 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07B1.7 | |||||||
| Corresponding_CDS_history | R07B1.7:wp194 | ||||||||
| R07B1.7:wp268 | |||||||||
| Corresponding_transcript | R07B1.7.1 | ||||||||
| Associated_feature | WBsf1006557 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051416 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1020570 | ||||||||
| Expr1155106 | |||||||||
| Expr2005442 | |||||||||
| Expr2023663 | |||||||||
| Microarray_results | SMD_R07B1.7 | ||||||||
| 186791_at | |||||||||
| Aff_R07B1.7 | |||||||||
| GPL14144_R07B1.7_331-390_0.970_1_A | |||||||||
| GPL19516_CGZ0031203 | |||||||||
| GPL21109_R07B1.7 | |||||||||
| GPL3518_CE01633 | |||||||||
| GPL8673_R07B1_7P00121 | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction | WBInteraction000323809 | ||||||||
| WBInteraction000334329 | |||||||||
| WBInteraction000349631 | |||||||||
| WBInteraction000352695 | |||||||||
| WBInteraction000403930 | |||||||||
| WBInteraction000406604 | |||||||||
| Map_info | Positive | Positive_clone | R07B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 1.73042 | |||||||
| Method | Gene |
