WormBase Tree Display for Gene: WBGene00010984
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| WBGene00010984 | SMap | S_parent | Sequence | R03A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nkat-3 | Paper_evidence | WBPaper00027001 | |||||
| Person_evidence | WBPerson2238 | ||||||||
| WBPerson4780 | |||||||||
| WBPerson4778 | |||||||||
| Sequence_name | R03A10.4 | ||||||||
| Molecular_name | R03A10.4a | ||||||||
| R03A10.4a.1 | |||||||||
| CE29335 | |||||||||
| R03A10.4b | |||||||||
| CE37983 | |||||||||
| R03A10.4b.1 | |||||||||
| Other_name | CELE_R03A10.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nkat-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 06 Apr 2006 09:26:55 | WBPerson2970 | Name_change | CGC_name | nkat-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nkat | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081377 | ||||||||
| 00081378 | |||||||||
| 00081379 | |||||||||
| 00081380 | |||||||||
| 00081381 | |||||||||
| 00081382 | |||||||||
| 00118282 | |||||||||
| 00118283 | |||||||||
| Ortholog (53) | |||||||||
| Paralog | WBGene00009232 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009628 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011436 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016333 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable kynurenine-oxoglutarate transaminase activity. Predicted to be involved in L-kynurenine metabolic process and biosynthetic process. Predicted to be located in mitochondrion. Expressed in gonad; pharyngeal muscle cell; and tail. Is an ortholog of human KYAT1 (kynurenine aminotransferase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R03A10.4a | |||||||
| R03A10.4b | |||||||||
| Corresponding_CDS_history | R03A10.4:wp63 | ||||||||
| R03A10.4:wp138 | |||||||||
| Corresponding_transcript | R03A10.4a.1 | ||||||||
| R03A10.4b.1 | |||||||||
| Other_sequence | Hbac_isotig01423 | ||||||||
| EX916473.1 | |||||||||
| SRC07436_1 | |||||||||
| MJ03866 | |||||||||
| MH01965 | |||||||||
| CRC11605_1 | |||||||||
| ES412772.1 | |||||||||
| HG01704 | |||||||||
| MHC10485_1 | |||||||||
| HG04095 | |||||||||
| ACC30130_1 | |||||||||
| Tcir_isotig02606 | |||||||||
| FD515136.1 | |||||||||
| MHC12251_1 | |||||||||
| Dviv_isotig18959 | |||||||||
| JI168048.1 | |||||||||
| ES742811.1 | |||||||||
| ES412335.1 | |||||||||
| MHC00084_1 | |||||||||
| HGC10859_1 | |||||||||
| Oden_isotig14149 | |||||||||
| PTC04453_1 | |||||||||
| ES744218.1 | |||||||||
| HBC04904_1 | |||||||||
| PPC03059_1 | |||||||||
| EX912265.1 | |||||||||
| EX564953.1 | |||||||||
| MH02462 | |||||||||
| CR05166 | |||||||||
| Tcol_isotig10023 | |||||||||
| Acan_isotig08618 | |||||||||
| Tcir_isotig02607 | |||||||||
| CSC02255_1 | |||||||||
| ES741496.1 | |||||||||
| EX008816.1 | |||||||||
| HBC05229_1 | |||||||||
| JI463562.1 | |||||||||
| Oden_isotig14148 | |||||||||
| HGC02324_1 | |||||||||
| EX911508.1 | |||||||||
| Dviv_isotig18960 | |||||||||
| Name_isotig08170 | |||||||||
| EX008963.1 | |||||||||
| FC813074.1 | |||||||||
| PT04915 | |||||||||
| Associated_feature | WBsf648803 | ||||||||
| WBsf236769 | |||||||||
| WBsf236770 | |||||||||
| WBsf236771 | |||||||||
| WBsf236772 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051164 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017342 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034547 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065065 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065064 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12134 | ||||||||
| Expr13095 | |||||||||
| Expr1012840 | |||||||||
| Expr1034814 | |||||||||
| Expr1154872 | |||||||||
| Expr2014267 | |||||||||
| Expr2032507 | |||||||||
| Drives_construct | WBCnstr00020224 | ||||||||
| WBCnstr00031016 | |||||||||
| Construct_product | WBCnstr00031016 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (71) | |||||||||
| Map_info | Map | X | Position | 22.6615 | Error | 0.009654 | |||
| Positive | Positive_clone | R03A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027001 | ||||||||
| WBPaper00028483 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
