WormBase Tree Display for Gene: WBGene00010896

WBGene00010896 SMap: S_parent: Sequence: M28
  Identity: Version: 3
    Name: CGC_name: snu-13
      Sequence_name: M28.5
      Molecular_name: M28.5
        M28.5.1
        CE02283
      Other_name: phi-9 Person_evidence: WBPerson2582
        CELE_M28.5 Accession_evidence: NDB BX284602
      Public_name: snu-13
    DB_info: Database: AceView gene 2K948
        WormQTL gene WBGene00010896
        WormFlux gene WBGene00010896
        NDB locus_tag CELE_M28.5
        Panther gene CAEEL|WormBase=WBGene00010896|UniProtKB=Q21568
          family PTHR23105
        NCBI gene 174645
        RefSeq protein NM_001393180.1
        SwissProt UniProtAcc Q21568
        TREEFAM TREEFAM_ID TF300184
        UniProt_GCRP UniProtAcc Q21568
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Mar 2005 13:54:35 WBPerson2970 Name_change: Other_name: phi-9
        3 11 Mar 2021 09:37:10 WBPerson1983 Name_change: CGC_name: snu-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snu
    Allele (16)
    RNASeq_FPKM (74)
    GO_annotation (18)
    Contained_in_operon: CEOP2500
    Ortholog (40)
    Paralog: WBGene00004412 Caenorhabditis elegans From_analysis: Panther
      WBGene00004419 Caenorhabditis elegans From_analysis: Panther
      WBGene00009993 Caenorhabditis elegans From_analysis: Panther
      WBGene00012964 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
      WBGene00017997 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome; maturation of LSU-rRNA; and maturation of SSU-rRNA. Predicted to be located in nucleolus. Predicted to be part of ribonucleoprotein complex. Is an ortholog of human SNU13 (small nuclear ribonucleoprotein 13). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M28.5
    Corresponding_transcript: M28.5.1
    Other_sequence (80)
    Associated_feature: WBsf650515
      WBsf989419
      WBsf223825
      WBsf223826
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1014225
      Expr1034779
      Expr1154736
      Expr2005274
      Expr2023493
    Drives_construct: WBCnstr00031071
    Construct_product: WBCnstr00031071
    Microarray_results (22)
    Expression_cluster (175)
    Interaction (246)
  Map_info: Map: II Position: 3.12292
    Positive: Positive_clone: M28 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031949
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00062599
    WBPaper00063976
    WBPaper00064632
    WBPaper00065012
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene