WormBase Tree Display for Gene: WBGene00010867

WBGene00010867 SMap: S_parent: Sequence: M04G12
  Identity: Version: 3
    Name: CGC_name: ifbp-1
      Sequence_name: M04G12.1
      Molecular_name (30)
      Other_name: tag-260
        CELE_M04G12.1 Accession_evidence: NDB BX284605
      Public_name: ifbp-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Apr 2005 11:55:18 WBPerson2970 Name_change: CGC_name: tag-260
        3 10 Sep 2020 13:47:56 WBPerson1983 Name_change: CGC_name: ifbp-1
                Other_name: tag-260
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ifbp
    Allele (166)
    Strain: WBStrain00031982
      WBStrain00036086
    RNASeq_FPKM (74)
    GO_annotation: 00003496
      00003497
      00051747
      00051748
      00051749
      00051750
      00051751
      00051752
      00051753
      00051754
    Ortholog: WBGene00052780 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028964 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154691 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00102098 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00138176 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225359 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1234 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5397 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6630 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5126 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18673 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6980 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5670 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13826 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11024 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1968 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00649.g13148 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tag-260 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19798 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00149.g5683 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03841 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07189 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23546 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50156500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16227 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243091 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00118711 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00264597 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285094 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0030400 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1968 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-030131-7809 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-040426-2574 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-050420-389 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:21728 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
      HGNC:14282 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:21729 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:2442463 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:2443921 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:2442159 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:1308312 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:1310994 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:1589517 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
    Paralog: WBGene00009939 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in common variable immunodeficiency 14 and neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures. Is an ortholog of human IRF2BP2 (interferon regulatory factor 2 binding protein 2) and IRF2BPL (interferon regulatory factor 2 binding protein like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0081327 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14282)
      DOID:0081156 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:21729)
  Molecular_info: Corresponding_CDS: M04G12.1a
      M04G12.1b
      M04G12.1c
      M04G12.1d
      M04G12.1e
      M04G12.1f
      M04G12.1g
      M04G12.1h
      M04G12.1i
      M04G12.1j
    Corresponding_CDS_history: M04G12.1a:wp90
    Corresponding_transcript (10)
    Other_sequence (51)
    Associated_feature (25)
  Experimental_info: RNAi_result: WBRNAi00050916 Inferred_automatically: RNAi_primary
      WBRNAi00034431 Inferred_automatically: RNAi_primary
      WBRNAi00046174 Inferred_automatically: RNAi_primary
      WBRNAi00017183 Inferred_automatically: RNAi_primary
      WBRNAi00073227 Inferred_automatically: RNAi_primary
      WBRNAi00076576 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018818
      Expr1034761
      Expr1154614
      Expr2017250
      Expr2035386
    Drives_construct: WBCnstr00031098
    Construct_product: WBCnstr00031098
    Microarray_results (36)
    Expression_cluster (151)
    Interaction (148)
  Map_info: Map: V Position: 5.20783 Error: 0.004132
    Positive: Positive_clone: M04G12 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5214
        4908
        5548
    Pseudo_map_position
  Reference: WBPaper00029058
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene