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WormBase Tree Display for Gene: WBGene00028964

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Name Class

WBGene00028964SMapS_parentSequencecb25.fpc0156
IdentityVersion3
NameCGC_nameCbr-ifbp-1From_analysisInferred_from_orthology
Sequence_nameCBG06728
Molecular_nameCBG06728a
CBG06728a.1
CBP01709
CBG06728b
CBP44828
CBG06728b.1
Other_nameCBG_06728Accession_evidenceNDBHE601320
Cbr-tag-260
Public_nameCBG06728
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-tag-260
303 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
428 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-ifbp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classifbp
Allele (15)
RNASeq_FPKMWBls:000000239.3458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
39.839From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
47.3486From_analysisRNASeq.briggsae.WBls:0000002.control_mean
62.861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.5107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
39.5924From_analysisRNASeq.briggsae.WBls:0000002.control_median
42.1391From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.15678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.13314From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.1095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.29509From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.85379From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.8548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
15.0568From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.2587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.7507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
13.9712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.5722From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.0257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002723.7748From_analysisRNASeq.briggsae.WBls:0000027.control_mean
25.3838From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
38.5635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.37717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
31.9736From_analysisRNASeq.briggsae.WBls:0000027.control_median
40.6221From_analysisRNASeq.briggsae.WBls:0000027.control_mean
91.1638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003571.07From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003819.6647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
48.7817From_analysisRNASeq.briggsae.WBls:0000038.control_mean
53.0422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
55.832From_analysisRNASeq.briggsae.WBls:0000038.control_median
58.6218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
63.7982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.0361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
10.1545From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
13.0371From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.6864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.15277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
13.3084From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.6251From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.3438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
19.2587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006317.765From_analysisRNASeq.briggsae.WBls:0000063.control_mean
19.9157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.2673From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
22.1265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
25.5153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.4813From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.6653From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.0633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010124.6864From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.1083From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.6653From_analysisRNASeq.briggsae.total_over_all_stages.control_median
30.3032From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
ParalogWBGene00026629Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Interferon regulatory factor 2-binding protein zinc finger and Interferon regulatory factor 2-binding protein 1 & 2, zinc finger. Is an ortholog of C. elegans ifbp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06728a
CBG06728b
Corresponding_CDS_historyCBG06728:bp194
CBG06728:bp255
Corresponding_transcriptCBG06728a.1
CBG06728b.1
Other_sequence (35)
Experimental_infoExpr_patternExpr1057410
Microarray_resultsGPL8303_CB6_WBGene00028964_A
GPL8303_CB6_WBGene00028964_B
GPL14143_CBG06728_958-1017_0.940_4_C
GPL14143_CBG06728_1029-1088_0.951_1_A
GPL14143_CBG06728_1113-1172_0.906_13_B
MethodGene