WormBase Tree Display for Gene: WBGene00010682
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| WBGene00010682 | SMap | S_parent | Sequence | K08F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nsph-1.1 | Person_evidence | WBPerson18244 | |||||
| Sequence_name | K08F8.5 | ||||||||
| Molecular_name | K08F8.5a | ||||||||
| K08F8.5a.1 | |||||||||
| CE52477 | |||||||||
| K08F8.5b | |||||||||
| CE43295 | |||||||||
| K08F8.5b.1 | |||||||||
| Other_name | CELE_K08F8.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | nsph-1.1 | ||||||||
| DB_info | Database | AceView | gene | 2J57 | |||||
| WormQTL | gene | WBGene00010682 | |||||||
| WormFlux | gene | WBGene00010682 | |||||||
| NDB | locus_tag | CELE_K08F8.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010682|UniProtKB=Q21365 | |||||||
| family | PTHR31578 | ||||||||
| NCBI | gene | 187165 | |||||||
| RefSeq | protein | NM_001361866.2 | |||||||
| NM_063463.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF316764 | |||||||
| TrEMBL | UniProtAcc | P90926 | |||||||
| Q21365 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21365 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Mar 2018 11:09:16 | WBPerson4025 | Event | Split_into | WBGene00303068 | ||||
| 3 | 10 Jul 2021 01:09:27 | WBPerson1983 | Name_change | CGC_name | nsph-1.1 | ||||
| Split_into | WBGene00303068 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nsph | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00007308 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013474 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00043743 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00194734 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013956 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016516 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022763 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020202 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in ABalpppppp; ABpraaappp; NSM; Y cell; and in male based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Cytosolic motility protein. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08F8.5a | |||||||
| K08F8.5b | |||||||||
| Corresponding_CDS_history | K08F8.5a:wp263 | ||||||||
| K08F8.5b:wp196 | |||||||||
| K08F8.5c:wp264 | |||||||||
| Corresponding_transcript | K08F8.5a.1 | ||||||||
| K08F8.5b.1 | |||||||||
| Other_sequence | JI219299.1 | ||||||||
| ACC25014_1 | |||||||||
| Acan_isotig16693 | |||||||||
| Oden_isotig15499 | |||||||||
| EX540039.1 | |||||||||
| Associated_feature | WBsf657997 | ||||||||
| WBsf988819 | |||||||||
| WBsf1012744 | |||||||||
| WBsf221812 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00095063 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034157 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050331 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015474 | ||||||||
| Expr1154033 | |||||||||
| Expr2004938 | |||||||||
| Expr2023160 | |||||||||
| Drives_construct | WBCnstr00031224 | ||||||||
| Construct_product | WBCnstr00031224 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction | WBInteraction000163357 | ||||||||
| WBInteraction000199079 | |||||||||
| WBInteraction000270271 | |||||||||
| WBInteraction000289046 | |||||||||
| WBInteraction000328031 | |||||||||
| WBInteraction000346412 | |||||||||
| WBInteraction000424377 | |||||||||
| WBInteraction000503216 | |||||||||
| WBInteraction000521226 | |||||||||
| WBInteraction000547810 | |||||||||
| Map_info | Positive | Positive_clone | K08F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.884858 | |||||||
| Reference | WBPaper00064502 | ||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
