WormBase Tree Display for Gene: WBGene00010621
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WBGene00010621 | SMap | S_parent | Sequence | K07A12 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | egg | ||||||
Allele (59) | |||||||
Strain | WBStrain00036254 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00049503 | ||||||
00049504 | |||||||
00049505 | |||||||
Ortholog (25) | |||||||
Paralog (12) | |||||||
Structured_description | Concise_description | egg-6 encodes an extracellular leucine-rich repeat protein; egg-6 is required for proper organization of the apical extracellular matrix. | Paper_evidence | WBPaper00040698 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 27 Jan 2012 00:00:00 | ||||||
Automated_description | Predicted to be located in apical plasma membrane. Expressed in excretory system; neurons; pharynx; rectal epithelial cell; and vulva. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K07A12.2 | |||||
Corresponding_transcript | K07A12.2.1 | ||||||
Other_sequence (31) | |||||||
Associated_feature (18) | |||||||
Experimental_info | RNAi_result | WBRNAi00003949 | Inferred_automatically | RNAi_primary | |||
WBRNAi00025894 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085833 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025895 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000335 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034037 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050096 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9900 | ||||||
Expr9949 | |||||||
Expr1010463 | |||||||
Expr1034639 | |||||||
Expr1153798 | |||||||
Expr2011204 | |||||||
Expr2029440 | |||||||
Drives_construct | WBCnstr00014386 | ||||||
WBCnstr00031280 | |||||||
Construct_product | WBCnstr00010001 | ||||||
WBCnstr00014386 | |||||||
WBCnstr00031280 | |||||||
Microarray_results | SMD_K07A12.2 | ||||||
173039_s_at | |||||||
194069_s_at | |||||||
A_12_P103947 | |||||||
Aff_K07A12.2 | |||||||
GPL13394_WBGene00010621 | |||||||
GPL13914_K07A12.2 | |||||||
GPL14144_K07A12.2_2270-2329_0.912_10_B | |||||||
GPL14144_K07A12.2_2355-2414_0.919_6_A | |||||||
GPL14144_K07A12.2_2480-2539_0.909_14_C | |||||||
GPL19516_CGZ0028115 | |||||||
GPL21109_K07A12.2 | |||||||
GPL3518_CE11866 | |||||||
GPL8304_CE_WBGene00010621_A | |||||||
GPL8673_K07A12_2P01761 | |||||||
GPL8673_K07A12_2P02138 | |||||||
GPL8673_K07A12_2P02801 | |||||||
GPL9450_K07A12.2 | |||||||
cea2.p.14299 | |||||||
Expression_cluster (201) | |||||||
Interaction (101) | |||||||
Map_info | Map | I | Position | 3.01725 | Error | 9.1e-05 | |
Positive | Positive_clone | K07A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5734 | |||||
5735 | |||||||
Pos_neg_data | 10959 | ||||||
10960 | |||||||
10961 | |||||||
10962 | |||||||
10963 | |||||||
10964 | |||||||
10965 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038651 | ||||||
WBPaper00040698 | |||||||
WBPaper00042709 | |||||||
WBPaper00048267 | |||||||
WBPaper00055090 | |||||||
WBPaper00061137 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |