WormBase Tree Display for Gene: WBGene00010514

WBGene00010514 SMap: S_parent: Sequence: K02E11
  Identity: Version: 1
    Name: Sequence_name: K02E11.5
      Molecular_name: K02E11.5
        K02E11.5.1
        CE11652
      Other_name: CELE_K02E11.5 Accession_evidence: NDB BX284605
      Public_name: K02E11.5
    DB_info: Database: AceView gene 5O733
        WormQTL gene WBGene00010514
        WormFlux gene WBGene00010514
        NDB locus_tag CELE_K02E11.5
        Panther gene CAEEL|WormBase=WBGene00010514|UniProtKB=Q21144
          family PTHR35182
        NCBI gene 186896
        RefSeq protein NM_074125.2
        TREEFAM TREEFAM_ID TF319413
        TrEMBL UniProtAcc Q21144
        UniProt_GCRP UniProtAcc Q21144
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (23)
    RNASeq_FPKM (74)
    Ortholog (24)
    Paralog: WBGene00009056 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010512 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010513 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00020589 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010516 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00015281 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00022230 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010515 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00010518 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
    Structured_description: Automated_description: Enriched in AFD; interfacial epithelial cell; pharyngeal-intestinal valve cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; bisphenol A; and Psoralens based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K02E11.5
    Corresponding_transcript: K02E11.5.1
    Associated_feature: WBsf647521
      WBsf232894
  Experimental_info: RNAi_result: WBRNAi00033870 Inferred_automatically: RNAi_primary
      WBRNAi00049715 Inferred_automatically: RNAi_primary
      WBRNAi00016462 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028485
      Expr1153435
      Expr2004695
      Expr2022920
    Drives_construct: WBCnstr00031362
    Construct_product: WBCnstr00031362
    Microarray_results (15)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049954:BPA_downregulated
      WBPaper00050080:rbr-2(tm3141)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050990:arcade_intestinal-valve_enriched
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053094:adr-2(ok735)_neuron_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054872:egl-9(sa307)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055626:pry-1(mu38)_upregulated
      WBPaper00055648:male-tail_expressed
      WBPaper00055648:nerve-ring_expressed
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00058948:PA14_downregulated
      WBPaper00059253:sucrose_stearic-acid_downregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:Z1_Z4
      WBPaper00061405:S.aureus_downregulated_starvation
      WBPaper00061527:F40F8.4-C33G8.4
      WBPaper00061613:human-amyloid-beta_downregulated
      WBPaper00061651:AMsh_enriched
      WBPaper00061651:PHsh_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062197:mec-8_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064716:paraquat_downregulated
      WBPaper00064841:tent-5(tm3504)_downregulated_transcript
      WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:45_0
      WBPaper00065841:121_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066005:RAGA-1_degradation_somatic_upregulated
      WBPaper00066110:Cisplatin_upregulated_tetraploid
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      cgc4386_cluster_2_6
      cgc4489_group_12
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00027342:alpha-Synuclein(A53T)_downregulated
      WBPaper00027342:alpha-Synuclein(WT)_downregulated
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00035227:heat_shock_regulated
      WBPaper00035892:Y.pestis_regulated
      WBPaper00036286:Pattern_C
      WBPaper00036286:Pattern_I
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00042258:DA1877_upregulated_GravidAdult
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00055435:AuNPs_upregulated
      WBPaper00055435:MUA-AuNP-0.5_upregulated
      [cgc5976]:class_1
    Interaction (104)
  Map_info: Positive: Positive_clone: K02E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 6.21239
  Method: Gene