WormBase Tree Display for Gene: WBGene00020589
expand all nodes | collapse all nodes | view schema
| WBGene00020589 | SMap | S_parent | Sequence | T19H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T19H12.3 | |||||||
| Molecular_name | T19H12.3 | ||||||||
| T19H12.3.1 | |||||||||
| CE30836 | |||||||||
| Other_name | CELE_T19H12.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T19H12.3 | ||||||||
| DB_info | Database | AceView | gene | 5F365 | |||||
| WormQTL | gene | WBGene00020589 | |||||||
| WormFlux | gene | WBGene00020589 | |||||||
| NDB | locus_tag | CELE_T19H12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020589|UniProtKB=Q8MPT1 | |||||||
| family | PTHR35182 | ||||||||
| NCBI | gene | 178879 | |||||||
| RefSeq | protein | NM_001028977.3 | |||||||
| TREEFAM | TREEFAM_ID | TF319413 | |||||||
| TrEMBL | UniProtAcc | Q8MPT1 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MPT1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00009056 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00010512 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010513 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010514 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010515 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010516 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010518 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00015281 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022230 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in AMshL; AMshR; and amphid sheath cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray; RNA-seq; and proteomic studies. Is affected by nine chemicals including rotenone; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19H12.3 | |||||||
| Corresponding_CDS_history | T19H12.3a:wp142 | ||||||||
| T19H12.3b:wp142 | |||||||||
| Corresponding_transcript | T19H12.3.1 | ||||||||
| Associated_feature | WBsf231707 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018867 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1028914 | ||||||||
| Expr1157127 | |||||||||
| Expr2006272 | |||||||||
| Expr2024490 | |||||||||
| Drives_construct | WBCnstr00025025 | ||||||||
| Construct_product | WBCnstr00025025 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | T19H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -3.79733 | |||||||
| Method | Gene |
