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WormBase Tree Display for Gene: WBGene00010501

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Name Class

WBGene00010501SMapS_parentSequenceK02C4
IdentityVersion1
NameSequence_nameK02C4.2
Molecular_nameK02C4.2
K02C4.2.1
CE41246
Other_nameCELE_K02C4.2Accession_evidenceNDBBX284602
Public_nameK02C4.2
DB_infoDatabaseAceViewgene2I367
WormQTLgeneWBGene00010501
WormFluxgeneWBGene00010501
NDBlocus_tagCELE_K02C4.2
PanthergeneCAEEL|WormBase=WBGene00010501|UniProtKB=Q09403
familyPTHR34401
NCBIgene174298
RefSeqproteinNM_182159.7
TREEFAMTREEFAM_IDTF321757
TrEMBLUniProtAccQ09403
UniProt_GCRPUniProtAccQ09403
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (15)
RNASeq_FPKM (74)
Ortholog (25)
ParalogWBGene00008032Caenorhabditis elegansFrom_analysisPanther
WBGene00010135Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013633Caenorhabditis elegansFrom_analysisPanther
WBGene00014039Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in OLL; PVD; dopaminergic neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including metformin; Sirolimus; and Psoralens based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK02C4.2
Corresponding_CDS_historyK02C4.2:wp91
K02C4.2:wp177
Corresponding_transcriptK02C4.2.1
Associated_featureWBsf221683
Experimental_infoExpr_patternExpr1020575
Expr1153405
Expr2004675
Expr2022901
Drives_constructWBCnstr00031371
Construct_productWBCnstr00031371
Microarray_results (18)
Expression_clusterWBPaper00036375:enriched_in_PVD_OLL
WBPaper00037682:sma-2_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00054796:cav-1(RNAi)_downregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L2
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056284:ints-5(RNAi)_upregulated
WBPaper00056284:ints-7(RNAi)_upregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056826:SGP_biased
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059191:hsp-16.2p-LIN-29_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060445:ikb-1(nr2027)_downregulated_L1
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:172183_at-176110_at
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00064494:postdauer_upregulated_WholeAnimal
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065392:Lb.delbrueckii_downregulated
WBPaper00065392:Lb.plantarum_downregulated
WBPaper00065392:Lb.reuteri_downregulated
WBPaper00065392:Lb.rhamnosus_downregulated
WBPaper00065392:P.pentosaceus_downregulated
WBPaper00065841:33_0
WBPaper00065841:33_1
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00034661:AgNPs_upregulated
WBPaper00036130:mir-243_up_regulated
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041207:CE_dauer_up
WBPaper00044535:male_downregulated
WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (15)
Map_infoPositivePositive_cloneK02C4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.662076
MethodGene