WormBase Tree Display for Gene: WBGene00010479

WBGene00010479 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: Sequence_name: K01G5.8
      Molecular_name: K01G5.8a
        K01G5.8a.1
        CE16198
        K01G5.8b
        CE16199
        K01G5.8b.1
      Other_name: CELE_K01G5.8 Accession_evidence: NDB BX284603
      Public_name: K01G5.8
    DB_info: Database: AceView gene 3L830
        WormQTL gene WBGene00010479
        WormFlux gene WBGene00010479
        NDB locus_tag CELE_K01G5.8
        Panther gene CAEEL|WormBase=WBGene00010479|UniProtKB=G5EDH3
          family PTHR13282
        NCBI gene 176500
        RefSeq protein NM_001392206.1
            NM_066965.6
        TREEFAM TREEFAM_ID TF314020
        TrEMBL UniProtAcc G5ECC8
            G5EDH3
        UniProt_GCRP UniProtAcc G5EDH3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    RNASeq_FPKM (74)
    GO_annotation: 00011520
      00011521
    Contained_in_operon: CEOP3700
    Ortholog (36)
    Structured_description: Automated_description: Located in nucleolus. Is an ortholog of human FAM32A (family with sequence similarity 32 member A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K01G5.8a
      K01G5.8b
    Corresponding_transcript: K01G5.8a.1
      K01G5.8b.1
    Other_sequence (56)
    Associated_feature: WBsf651474
      WBsf651475
      WBsf227497
  Experimental_info: RNAi_result: WBRNAi00033833 Inferred_automatically: RNAi_primary
      WBRNAi00006696 Inferred_automatically: RNAi_primary
      WBRNAi00025836 Inferred_automatically: RNAi_primary
      WBRNAi00027395 Inferred_automatically: RNAi_primary
      WBRNAi00063089 Inferred_automatically: RNAi_primary
      WBRNAi00016412 Inferred_automatically: RNAi_primary
      WBRNAi00049639 Inferred_automatically: RNAi_primary
      WBRNAi00023513 Inferred_automatically: RNAi_primary
      WBRNAi00025837 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9469
      Expr1018403
      Expr1034574
      Expr1153366
      Expr2004656
      Expr2022884
    Drives_construct: WBCnstr00031389
    Construct_product: WBCnstr00014034
      WBCnstr00031389
    Microarray_results (31)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:coelomocytes_larva_enriched
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038118:aak-2(gt33)_downregulated
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051404:alg-5(ram2)_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053599:mitosis_vs_meiosis_upregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00055049:S.gordonii_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056165:MINA-1_interacting_mRNA
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061340:ADL_parent
      WBPaper00061340:I2_grandparent
      WBPaper00061340:Neuroblast_AWC_SAAVx
      WBPaper00061340:PVQ_parent
      WBPaper00061527:F54E7.8-orc-5_6376
      WBPaper00061651:M3_enriched
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062554:MAGU-2_interacting
      WBPaper00064122:vulva_transcriptome
      WBPaper00064716:paraquat_upregulated
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      cgc4386_cluster_6_1
      cgc4489_group_3
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00034661:AgNPs_upregulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00040426:CYD-1_CDK-4_upregulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(66_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
  Map_info: Positive: Positive_clone: K01G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 5.07998
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
  Method: Gene