WormBase Tree Display for Gene: WBGene00010470
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WBGene00010470 | SMap | S_parent | Sequence | K01D12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cdr-4 | Person_evidence | WBPerson184 | |||
Sequence_name | K01D12.11 | ||||||
Molecular_name | K01D12.11 | ||||||
K01D12.11.1 | |||||||
CE06050 | |||||||
Other_name | CELE_K01D12.11 | Accession_evidence | NDB | BX284605 | |||
Public_name | cdr-4 | ||||||
DB_info | Database | AceView | gene | 5M886 | |||
WormQTL | gene | WBGene00010470 | |||||
WormFlux | gene | WBGene00010470 | |||||
NDB | locus_tag | CELE_K01D12.11 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010470|UniProtKB=G5EDZ7 | |||||
family | PTHR12289 | ||||||
NCBI | gene | 259654 | |||||
RefSeq | protein | NM_073709.7 | |||||
TREEFAM | TREEFAM_ID | TF314915 | |||||
TrEMBL | UniProtAcc | G5EDZ7 | |||||
UniProt_GCRP | UniProtAcc | G5EDZ7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cdr | ||||||
Allele (23) | |||||||
Strain | WBStrain00031607 | ||||||
WBStrain00031676 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00015092 | ||||||
00015093 | |||||||
00015094 | |||||||
00015095 | |||||||
00015096 | |||||||
00105659 | |||||||
Ortholog (44) | |||||||
Paralog (12) | |||||||
Structured_description | Concise_description | cdr-4 encodes a predicted transmembrane protein that is a member of the CDR (cadmium responsive) family of proteins; cdr-4 expression is upregulated in response to cadmium treatment. | Paper_evidence | WBPaper00024695 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 15 Apr 2014 00:00:00 | ||||||
Automated_description | Involved in stress response to cadmium ion. Acts upstream of or within IRE1-mediated unfolded protein response. Located in lysosome. Expressed in pm5; pm6; and pm7. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K01D12.11 | |||||
Corresponding_transcript | K01D12.11.1 | ||||||
Associated_feature | WBsf669504 | ||||||
WBsf982014 | |||||||
WBsf234673 | |||||||
Experimental_info | RNAi_result (12) | ||||||
Expr_pattern | Expr4094 | ||||||
Expr7891 | |||||||
Expr1020804 | |||||||
Expr1153344 | |||||||
Expr2009824 | |||||||
Expr2028064 | |||||||
Drives_construct | WBCnstr00012972 | ||||||
WBCnstr00031395 | |||||||
Construct_product | WBCnstr00012972 | ||||||
WBCnstr00031395 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (399) | |||||||
Interaction (14) | |||||||
Map_info | Map | V | Position | 4.11942 | Error | 0.00968 | |
Positive | Positive_clone | K01D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5540 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00005432 | ||||||
WBPaper00024695 | |||||||
WBPaper00031378 | |||||||
WBPaper00035429 | |||||||
WBPaper00038491 | |||||||
WBPaper00040135 | |||||||
WBPaper00055090 | |||||||
WBPaper00058665 | |||||||
WBPaper00062289 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |