WormBase Tree Display for Gene: WBGene00010380

WBGene00010380 SMap: S_parent: Sequence: H12D21
  Identity: Version: 2
    Name: CGC_name: mpst-2 Person_evidence: WBPerson1852
      Sequence_name: H12D21.4
      Molecular_name: H12D21.4
        H12D21.4.1
        CE52984
      Other_name: CELE_H12D21.4 Accession_evidence: NDB BX284605
      Public_name: mpst-2
    DB_info: Database: AceView gene 5P372
        WormQTL gene WBGene00010380
        WormFlux gene WBGene00010380
        NDB locus_tag CELE_H12D21.4
        Panther gene CAEEL|WormBase=WBGene00010380|UniProtKB=Q9XTX2
          family PTHR11364
        NCBI gene 186728
        RefSeq protein NM_074270.2
        TREEFAM TREEFAM_ID TF315133
        TrEMBL UniProtAcc Q9XTX2
        UniProt_GCRP UniProtAcc Q9XTX2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Mar 2011 11:09:17 WBPerson2970 Name_change: CGC_name: mpst-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mpst
    Allele (41)
    RNASeq_FPKM (74)
    GO_annotation: 00101269
      00101270
      00101271
      00117802
    Ortholog (42)
    Paralog: WBGene00008409 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011307 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010383 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00022006 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00017387 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022007 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable thiosulfate sulfurtransferase activity. Predicted to be located in mitochondrion. Is an ortholog of human MPST (mercaptopyruvate sulfurtransferase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H12D21.4
    Corresponding_CDS_history: H12D21.4:wp270
    Corresponding_transcript: H12D21.4.1
    Other_sequence: ACC05844_1
      EX549157.1
      EX549106.1
    Associated_feature: WBsf1002178
      WBsf1020944
  Experimental_info: RNAi_result: WBRNAi00049376 Inferred_automatically: RNAi_primary
      WBRNAi00081658 Inferred_automatically: RNAi_primary
      WBRNAi00016245 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017457
      Expr1153108
      Expr2013676
      Expr2031910
    Drives_construct: WBCnstr00031454
    Construct_product: WBCnstr00031454
    Microarray_results (16)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_downregulated
      WBPaper00048923:Aging_regulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00054872:egl-9(sa307)_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055137:S.maltophilia_downregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00058598:spn-4(tm291)_downregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:skn-1(lax188)_upregulated
      WBPaper00059253:stearic-acid_upregulated
      WBPaper00061340:NSM_parent
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061424:Diet_MYb131_upregulated
      WBPaper00061527:srj-42-srw-113
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      cgc4489_group_9
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00036123:Cadmium_regulated
      WBPaper00041939:control_vs_EtBr-exposed_3h
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
    Interaction (29)
  Map_info: Map: V Position: 7.00012 Error: 0.003401
    Positive: Positive_clone: H12D21 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040475
    WBPaper00055090
    WBPaper00065080
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene