WormBase Tree Display for Gene: WBGene00010123
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| WBGene00010123 | SMap | S_parent | Sequence | F55G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F55G11.2 | |||||||
| Molecular_name | F55G11.2 | ||||||||
| F55G11.2.1 | |||||||||
| CE18748 | |||||||||
| Other_name | CELE_F55G11.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F55G11.2 | ||||||||
| DB_info | Database | AceView | gene | 4N732 | |||||
| WormQTL | gene | WBGene00010123 | |||||||
| WormFlux | gene | WBGene00010123 | |||||||
| NDB | locus_tag | CELE_F55G11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010123|UniProtKB=Q9XUD8 | |||||||
| family | PTHR47155 | ||||||||
| NCBI | gene | 186337 | |||||||
| RefSeq | protein | NM_070082.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316078 | |||||||
| TrEMBL | UniProtAcc | Q9XUD8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUD8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01967284 | |||||||||
| WBVar01498996 | |||||||||
| WBVar00438818 | |||||||||
| WBVar00438819 | |||||||||
| WBVar00438820 | |||||||||
| WBVar00438821 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00438822 | |||||||||
| WBVar00264854 | |||||||||
| WBVar00264860 | |||||||||
| WBVar00093494 | |||||||||
| WBVar02134891 | |||||||||
| WBVar02134892 | |||||||||
| WBVar00951479 | |||||||||
| WBVar00951480 | |||||||||
| WBVar00951481 | |||||||||
| WBVar00951482 | |||||||||
| WBVar00951483 | |||||||||
| WBVar00951484 | |||||||||
| WBVar00951485 | |||||||||
| WBVar00951486 | |||||||||
| WBVar00951487 | |||||||||
| WBVar00951488 | |||||||||
| WBVar00951489 | |||||||||
| WBVar00951490 | |||||||||
| WBVar00951491 | |||||||||
| WBVar00951492 | |||||||||
| WBVar00951493 | |||||||||
| WBVar00951494 | |||||||||
| WBVar01581869 | |||||||||
| WBVar01549035 | |||||||||
| WBVar00091023 | |||||||||
| WBVar00264765 | |||||||||
| WBVar00192951 | |||||||||
| WBVar00192952 | |||||||||
| WBVar01499492 | |||||||||
| WBVar01499493 | |||||||||
| WBVar01500245 | |||||||||
| Strain | WBStrain00032498 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101703 | ||||||||
| Ortholog (72) | |||||||||
| Paralog (36) | |||||||||
| Structured_description | Concise_description | F55G11.2 encodes a protein containing a CUB (complement C1r/C1s, Uegf, Bmp1)-like domain; F55G11.2 expression is upregulated in response to infection with the human bacterial pathogen Pseudomonas aeruginosa; F55G11.2 expression is regulated by the ELT-2 GATA transcription factor. | Paper_evidence | WBPaper00028482 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jan 2013 00:00:00 | ||||||||
| Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55G11.2 | |||||||
| Corresponding_transcript | F55G11.2.1 | ||||||||
| Associated_feature | WBsf652318 | ||||||||
| WBsf231075 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032902 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015751 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048550 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11204 | ||||||||
| Expr1026799 | |||||||||
| Expr1152335 | |||||||||
| Expr2004245 | |||||||||
| Expr2022468 | |||||||||
| Drives_construct | WBCnstr00018219 | ||||||||
| WBCnstr00020808 | |||||||||
| WBCnstr00031649 | |||||||||
| Construct_product | WBCnstr00031649 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (326) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | F55G11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 6.78302 | |||||||
| Reference | WBPaper00028482 | ||||||||
| WBPaper00028789 | |||||||||
| WBPaper00035891 | |||||||||
| WBPaper00041800 | |||||||||
| WBPaper00047109 | |||||||||
| Method | Gene |
