WormBase Tree Display for Gene: WBGene00010115

WBGene00010115 SMap: S_parent: Sequence: F55F3
  Identity: Version: 2
    Name: CGC_name: aakb-1 Person_evidence: WBPerson2105
            WBPerson542
      Sequence_name: F55F3.1
      Molecular_name: F55F3.1
        F55F3.1.1
        CE18744
        F55F3.1.2
      Other_name: CELE_F55F3.1 Accession_evidence: NDB BX284606
      Public_name: aakb-1
    DB_info: Database: AceView gene XO377
        WormQTL gene WBGene00010115
        WormFlux gene WBGene00010115
        NDB locus_tag CELE_F55F3.1
        Panther gene CAEEL|WormBase=WBGene00010115|UniProtKB=Q9XUY2
          family PTHR10343
        NCBI gene 181492
        RefSeq protein NM_001381137.2
        TREEFAM TREEFAM_ID TF313827
        TrEMBL UniProtAcc Q9XUY2
        UniProt_GCRP UniProtAcc Q9XUY2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Feb 2006 09:28:57 WBPerson2970 Name_change: CGC_name: aakb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aakb
    Allele (60)
    Strain: WBStrain00001899
    RNASeq_FPKM (74)
    GO_annotation: 00102195
      00102196
      00102197
      00102198
      00102199
      00102200
    Ortholog (38)
    Paralog: WBGene00012928 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007222 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018522 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: aakb-1 encodes one of two C. elegans AMP kinase (AMPK) beta regulatory subunits. Paper_evidence: WBPaper00031352
          Curator_confirmed: WBPerson1843
          Date_last_updated: 14 Oct 2008 00:00:00
      Automated_description: Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Predicted to be located in cytoplasm and nucleus. Predicted to be part of nucleotide-activated protein kinase complex. Expressed in body wall musculature; neurons; non-striated muscle; rectal valve cell; and tail hypodermis. Is an ortholog of human PRKAB1 (protein kinase AMP-activated non-catalytic subunit beta 1) and PRKAB2 (protein kinase AMP-activated non-catalytic subunit beta 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55F3.1
    Corresponding_transcript: F55F3.1.1
      F55F3.1.2
    Other_sequence (58)
    Associated_feature: WBsf655224
      WBsf655225
      WBsf717395
      WBsf718759
      WBsf1007718
      WBsf1007719
      WBsf1007720
      WBsf1024292
      WBsf236610
      WBsf236611
  Experimental_info: RNAi_result: WBRNAi00048519 Inferred_automatically: RNAi_primary
      WBRNAi00102976 Inferred_automatically: RNAi_primary
      WBRNAi00102996 Inferred_automatically: RNAi_primary
      WBRNAi00032883 Inferred_automatically: RNAi_primary
      WBRNAi00102986 Inferred_automatically: RNAi_primary
      WBRNAi00015739 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6205
      Expr6206
      Expr11584
      Expr1017539
      Expr1034422
      Expr1152306
      Expr2009054
      Expr2027290
    Drives_construct: WBCnstr00002690
      WBCnstr00004393
      WBCnstr00031657
    Construct_product: WBCnstr00031657
    Microarray_results (22)
    Expression_cluster (133)
    Interaction: WBInteraction000039997
      WBInteraction000041783
      WBInteraction000041785
      WBInteraction000042721
      WBInteraction000047816
      WBInteraction000052906
      WBInteraction000103684
      WBInteraction000105407
      WBInteraction000162751
      WBInteraction000174263
      WBInteraction000177975
      WBInteraction000182329
      WBInteraction000196270
      WBInteraction000203698
      WBInteraction000211485
      WBInteraction000215613
      WBInteraction000230719
      WBInteraction000245687
      WBInteraction000250071
      WBInteraction000277693
      WBInteraction000280991
      WBInteraction000280992
      WBInteraction000280994
      WBInteraction000303858
      WBInteraction000303946
      WBInteraction000310876
      WBInteraction000310877
      WBInteraction000319223
      WBInteraction000324609
      WBInteraction000337790
      WBInteraction000341143
      WBInteraction000351308
      WBInteraction000351312
      WBInteraction000357363
      WBInteraction000357872
      WBInteraction000362944
      WBInteraction000365182
      WBInteraction000365224
      WBInteraction000366948
      WBInteraction000382480
      WBInteraction000386166
      WBInteraction000393014
      WBInteraction000395230
      WBInteraction000407110
      WBInteraction000408806
      WBInteraction000422541
      WBInteraction000429666
      WBInteraction000436653
      WBInteraction000438678
      WBInteraction000447594
      WBInteraction000456378
      WBInteraction000461856
      WBInteraction000465848
      WBInteraction000467888
      WBInteraction000471570
      WBInteraction000472089
      WBInteraction000473752
      WBInteraction000474162
      WBInteraction000474451
      WBInteraction000568288
  Map_info: Map: X Position: 14.7538 Error: 0.044339
    Positive: Positive_clone: F55F3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene