WormBase Tree Display for Sequence: F55F3
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F55F3 | DNA | F55F3 | 42521 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (13) | ||||
CDS_child (150) | ||||||
Transcript (21) | ||||||
Transposon | WBTransposon00000387 | 14119 | 13770 | |||
PCR_product (16) | ||||||
Allele (648) | ||||||
Oligo_set | Aff_F55F3.1 | 8892 | 10565 | |||
Aff_F55F3.2 | 14574 | 15789 | ||||
Aff_F55F3.3 | 18944 | 17905 | ||||
Aff_F55F3.4 | 40436 | 41081 | ||||
Aff_K11E4.5 | 2103 | 3212 | ||||
Feature_object (350) | ||||||
Feature_data | F55F3:Polysome | 1 | 42521 | |||
F55F3:TranscriptionallyActiveRegion | 1 | 42521 | ||||
F55F3:ChIPSeqTF | 1 | 42521 | ||||
F55F3:TRF | 1 | 42521 | ||||
F55F3:Dust | 1 | 42521 | ||||
F55F3:inverted | 1 | 42521 | ||||
Homol_data (21) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | ZK1086 | 42418 | ||||
Overlap_left | Y6D6A | |||||
Clone_left_end | F55F3 | 1 | ||||
ZK1086 | 22967 | |||||
Clone_right_end | F55F3 | 42521 | ||||
DB_info | Database | EMBL | NDB_AC | Z81550 | ||
NDB_SV | Z81550.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Steward CA | ||||
From_laboratory | HX | |||||
Date_directory | 980512 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | F55F3 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 383b80779c8bcff5c401ef6db2d0189a | ||||
Status | Finished | 12 May 1998 00:00:00 | ||||
Submitted | 06 Nov 1996 00:00:00 | |||||
Annotated | 01 Jan 1980 00:00:00 | |||||
Map | Sequence-X | Ends | Left | 7460 | ||
Right | 7480 | |||||
Interpolated_map_position | X | 14.855 | ||||
Assembly_tags | Finished Left | 4 | 1 | F55F3 | ||
Clone left end | 4 | 1 | F55F3 | |||
22967 | 22964 | ZK1086 | ||||
Clone right end | 42521 | 42518 | F55F3 | |||
annotation | 11767 | 11748 | Single stranded region in inverted repeat. Assembly confirmed by restriction digest. | |||
27510 | 27485 | [ ] Tandem repeat [ ] Single clone region [ ] Forced join [X] Other Comment: Number of Gs is uncertain | ||||
38775 | 38763 | 3 clones give 12 As. (edited to 13) 6 clones give 13 As 1 clone gives 14 As (edited to 13) | ||||
Finished Right | 42521 | 42518 | F55F3 | |||
Method | Genomic_canonical |