WormBase Tree Display for Gene: WBGene00010012
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| WBGene00010012 | SMap | S_parent | Sequence | F53H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | saeg-1 | Paper_evidence | WBPaper00038421 | |||||
| Person_evidence | WBPerson2754 | ||||||||
| Sequence_name | F53H10.2 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_F53H10.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | saeg-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 May 2011 10:23:08 | WBPerson2970 | Name_change | CGC_name | saeg-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | saeg | ||||||||
| Allele (160) | |||||||||
| Strain | WBStrain00036400 | ||||||||
| WBStrain00040198 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005341 | ||||||||
| 00005342 | |||||||||
| 00005343 | |||||||||
| 00068894 | |||||||||
| 00068895 | |||||||||
| 00068896 | |||||||||
| 00068897 | |||||||||
| 00068898 | |||||||||
| 00068899 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00005006 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009224 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022215 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013632 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022278 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable transcription corepressor activity. Predicted to be involved in negative regulation of DNA-templated transcription and regulation of transcription by RNA polymerase II. Located in nucleus. Is an ortholog of human MIDEAS (mitotic deacetylase associated SANT domain protein); TRERF1 (transcriptional regulating factor 1); and ZNF541 (zinc finger protein 541). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53H10.2a | |||||||
| F53H10.2b | |||||||||
| F53H10.2c | |||||||||
| F53H10.2d | |||||||||
| Corresponding_CDS_history | F53H10.2:wp90 | ||||||||
| Corresponding_transcript | F53H10.2a.1 | ||||||||
| F53H10.2b.1 | |||||||||
| F53H10.2c.1 | |||||||||
| F53H10.2d.1 | |||||||||
| Other_sequence (29) | |||||||||
| Associated_feature (30) | |||||||||
| Transcription_factor | WBTranscriptionFactor001137 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00001313 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048188 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012784 | ||||||||
| Expr1034364 | |||||||||
| Expr1152000 | |||||||||
| Expr2015579 | |||||||||
| Expr2033814 | |||||||||
| Drives_construct | WBCnstr00008659 | ||||||||
| WBCnstr00008667 | |||||||||
| WBCnstr00031742 | |||||||||
| Construct_product | WBCnstr00008659 | ||||||||
| WBCnstr00008667 | |||||||||
| WBCnstr00021805 | |||||||||
| WBCnstr00031742 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (213) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Map | V | Position | 2.82526 | Error | 0.001221 | |||
| Positive | Positive_clone | F53H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038421 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064064 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
