WormBase Tree Display for Gene: WBGene00010012
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WBGene00010012 | SMap | S_parent | Sequence | F53H10 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | saeg | ||||||
Allele (160) | |||||||
Strain | WBStrain00036400 | ||||||
WBStrain00040198 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00005341 | ||||||
00005342 | |||||||
00005343 | |||||||
00068894 | |||||||
00068895 | |||||||
00068896 | |||||||
00068897 | |||||||
00068898 | |||||||
00068899 | |||||||
Ortholog (42) | |||||||
Paralog | WBGene00005006 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00009224 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00022215 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00013632 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00022278 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable transcription corepressor activity. Predicted to be involved in negative regulation of DNA-templated transcription and regulation of transcription by RNA polymerase II. Located in nucleus. Is an ortholog of human MIDEAS (mitotic deacetylase associated SANT domain protein); TRERF1 (transcriptional regulating factor 1); and ZNF541 (zinc finger protein 541). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F53H10.2a | |||||
F53H10.2b | |||||||
F53H10.2c | |||||||
F53H10.2d | |||||||
Corresponding_CDS_history | F53H10.2:wp90 | ||||||
Corresponding_transcript | F53H10.2a.1 | ||||||
F53H10.2b.1 | |||||||
F53H10.2c.1 | |||||||
F53H10.2d.1 | |||||||
Other_sequence (29) | |||||||
Associated_feature (30) | |||||||
Transcription_factor | WBTranscriptionFactor001137 | ||||||
Experimental_info | RNAi_result | WBRNAi00001313 | Inferred_automatically | RNAi_primary | |||
WBRNAi00048188 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012784 | ||||||
Expr1034364 | |||||||
Expr1152000 | |||||||
Expr2015579 | |||||||
Expr2033814 | |||||||
Drives_construct | WBCnstr00008659 | ||||||
WBCnstr00008667 | |||||||
WBCnstr00031742 | |||||||
Construct_product | WBCnstr00008659 | ||||||
WBCnstr00008667 | |||||||
WBCnstr00021805 | |||||||
WBCnstr00031742 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (213) | |||||||
Interaction (65) | |||||||
Map_info | Map | V | Position | 2.82526 | Error | 0.001221 | |
Positive | Positive_clone | F53H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038421 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00064064 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |