WormBase Tree Display for Gene: WBGene00009945
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| WBGene00009945 | SMap | S_parent | Sequence | F52H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | bath-38 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F52H3.3 | ||||||||
| Molecular_name | F52H3.3 | ||||||||
| F52H3.3.1 | |||||||||
| CE03399 | |||||||||
| Other_name | CELE_F52H3.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | bath-38 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-38 | ||||
| 3 | 02 Mar 2018 10:40:21 | WBPerson4025 | Event | Split_into | WBGene00303061 | ||||
| Split_into | WBGene00303061 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (80) | |||||||||
| Structured_description | Automated_description | Expressed in several structures, including hypodermis and pharynx. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52H3.3 | |||||||
| Corresponding_CDS_history | F52H3.3a:wp264 | ||||||||
| F52H3.3b:wp264 | |||||||||
| Corresponding_transcript | F52H3.3.1 | ||||||||
| Other_sequence | CK855023.1 | ||||||||
| FC551982.1 | |||||||||
| ACC18986_1 | |||||||||
| AYC03767_1 | |||||||||
| JI180265.1 | |||||||||
| AW675915.1 | |||||||||
| XI02768 | |||||||||
| Acan_isotig06199 | |||||||||
| JI173692.1 | |||||||||
| Dviv_isotig08095 | |||||||||
| WBC02338_1 | |||||||||
| JI179352.1 | |||||||||
| JI165990.1 | |||||||||
| Oden_contig24382 | |||||||||
| CJC02372_1 | |||||||||
| JI467387.1 | |||||||||
| EX827919.1 | |||||||||
| PPC21113_1 | |||||||||
| Tcir_isotig16388 | |||||||||
| Hbac_isotig05331 | |||||||||
| CR04816 | |||||||||
| FK806779.1 | |||||||||
| JI224452.1 | |||||||||
| AE04489 | |||||||||
| XIC03488_1 | |||||||||
| Dviv_isotig08098 | |||||||||
| CRC12309_1 | |||||||||
| Acan_isotig06198 | |||||||||
| Dviv_isotig08097 | |||||||||
| XI01494 | |||||||||
| OVC05872_1 | |||||||||
| ACC17565_1 | |||||||||
| JI463414.1 | |||||||||
| EX827679.1 | |||||||||
| Name_isotig01779 | |||||||||
| Dviv_isotig21524 | |||||||||
| JI213276.1 | |||||||||
| Dviv_isotig21525 | |||||||||
| ACC07701_1 | |||||||||
| JI167490.1 | |||||||||
| JI180718.1 | |||||||||
| XIC00236_1 | |||||||||
| FC552466.1 | |||||||||
| Dviv_isotig08096 | |||||||||
| Associated_feature | WBsf650480 | ||||||||
| WBsf665227 | |||||||||
| WBsf666001 | |||||||||
| WBsf989222 | |||||||||
| WBsf1012953 | |||||||||
| WBsf223749 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00090589 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015442 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032644 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048030 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094875 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092973 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr145 | ||||||||
| Expr2100 | |||||||||
| Expr1012479 | |||||||||
| Expr1034333 | |||||||||
| Expr1151848 | |||||||||
| Expr2009554 | |||||||||
| Expr2027791 | |||||||||
| Drives_construct | WBCnstr00031796 | ||||||||
| Construct_product | WBCnstr00031796 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | II | Position | 1.83513 | Error | 0.003981 | |||
| Positive | Positive_clone | F52H3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
