WormBase Tree Display for Gene: WBGene00009945

WBGene00009945 SMap: S_parent: Sequence: F52H3
  Identity: Version: 3
    Name: CGC_name: bath-38 Person_evidence: WBPerson655
      Sequence_name: F52H3.3
      Molecular_name: F52H3.3
        F52H3.3.1
        CE03399
      Other_name: CELE_F52H3.3 Accession_evidence: NDB BX284602
      Public_name: bath-38
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Aug 2005 16:08:42 WBPerson2970 Name_change: CGC_name: bath-38
        3 02 Mar 2018 10:40:21 WBPerson4025 Event: Split_into: WBGene00303061
      Split_into: WBGene00303061
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: bath
    Allele (24)
    RNASeq_FPKM (74)
    Ortholog: WBGene00025710 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00110476 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053727 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125012 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190964 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224537 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6527 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6395 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10673 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8006 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20082 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27315 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4407 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g11150 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4982 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01035.g15444 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-bath-38 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7963 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00090.g3957 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12760 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005167 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11842 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20208500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5653 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00182616 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00248449 Onchocerca volvulus From_analysis: WormBase-Compara
    Paralog (80)
    Structured_description: Automated_description: Expressed in several structures, including hypodermis and pharynx. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F52H3.3
    Corresponding_CDS_history: F52H3.3a:wp264
      F52H3.3b:wp264
    Corresponding_transcript: F52H3.3.1
    Other_sequence (44)
    Associated_feature: WBsf650480
      WBsf665227
      WBsf666001
      WBsf989222
      WBsf1012953
      WBsf223749
  Experimental_info: RNAi_result: WBRNAi00090589 Inferred_automatically: RNAi_primary
      WBRNAi00015442 Inferred_automatically: RNAi_primary
      WBRNAi00032644 Inferred_automatically: RNAi_primary
      WBRNAi00048030 Inferred_automatically: RNAi_primary
      WBRNAi00094875 Inferred_automatically: RNAi_primary
      WBRNAi00092973 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr145
      Expr2100
      Expr1012479
      Expr1034333
      Expr1151848
      Expr2009554
      Expr2027791
    Drives_construct: WBCnstr00031796
    Construct_product: WBCnstr00031796
    Microarray_results (18)
    Expression_cluster (138)
    Interaction (13)
  Map_info: Map: II Position: 1.83513 Error: 0.003981
    Positive: Positive_clone: F52H3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene