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WormBase Tree Display for Gene: WBGene00009429

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Name Class

WBGene00009429SMapS_parentSequenceF35E12
IdentityVersion2
NameCGC_nameirg-5Person_evidenceWBPerson9709
Sequence_nameF35E12.5
Molecular_nameF35E12.5
F35E12.5.1
CE38510
Other_nameCELE_F35E12.5Accession_evidenceNDBBX284605
Public_nameirg-5
DB_infoDatabaseAceViewgene5O218
WormQTLgeneWBGene00009429
WormFluxgeneWBGene00009429
NDBlocus_tagCELE_F35E12.5
PanthergeneCAEEL|WormBase=WBGene00009429|UniProtKB=O02357
familyPTHR21447
NCBIgene185307
RefSeqproteinNM_001380807.2
TREEFAMTREEFAM_IDTF316592
TrEMBLUniProtAccO02357
UniProt_GCRPUniProtAccO02357
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2016 15:57:39WBPerson2970Name_changeCGC_nameirg-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classirg
Allele (24)
StrainWBStrain00033153
RNASeq_FPKM (74)
GO_annotation00027140
00027141
Contained_in_operonCEOP5575
OrthologWBGene00135719Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00153028Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00194000Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00147711Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00138857Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00136453Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00052866Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00057832Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00072566Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00068261Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00179773Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00032607Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g880Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g9986Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20641Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g20642Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g21251Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g5209Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g5210Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18759Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18760Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g6365Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2668Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2669Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2670Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2671Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2674Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2675Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7060Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g18605Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8256Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8662Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7689Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g16336Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14114Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00285.g8688Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00285.g8690Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00288.g8753Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00751.g15113Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02903.g28332Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12932Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_20506Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018642Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_019507Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020528Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_50166200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g16314Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00130111Caenorhabditis japonicaFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF35E12.5
Corresponding_transcriptF35E12.5.1
Associated_featureWBsf718448
WBsf1001883
WBsf1020761
WBsf234856
Experimental_infoRNAi_resultWBRNAi00014332Inferred_automaticallyRNAi_primary
WBRNAi00082471Inferred_automaticallyRNAi_primary
WBRNAi00046337Inferred_automaticallyRNAi_primary
WBRNAi00082614Inferred_automaticallyRNAi_primary
WBRNAi00078256Inferred_automaticallyRNAi_primary
Expr_patternExpr15756
Expr1012889
Expr1150225
Expr2012820
Drives_constructWBCnstr00005986
WBCnstr00017593
WBCnstr00032194
Construct_productWBCnstr00032194
Microarray_results (16)
Expression_cluster (405)
Interaction (43)
Map_infoMapVPosition5.58641
PositivePositive_cloneF35E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (16)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene