WormBase Tree Display for Operon: CEOP5575
expand all nodes | collapse all nodes | view schema
| CEOP5575 | SMap | S_parent | Canonical_parent | CHROMOSOME_V | |
|---|---|---|---|---|---|
| Species | Caenorhabditis elegans | ||||
| Contains_gene | WBGene00009429 | SL1 | Feature_evidence | WBsf016143 | |
| SL2 | Feature_evidence | WBsf017090 | |||
| WBGene00009430 | SL1 | Feature_evidence | WBsf022314 | ||
| SL2 | From_analysis | modENCODE_Waterston_RNAseq | |||
| Description | C. elegans Deprecated Operon, this was previously seen as an active operon. | ||||
| Method | Deprecated_operon | ||||
| History | Deprecated | [110322 pad] Deprecated following 2010 re-analysis based on RNASeq data. | Person_evidence | WBPerson71 | |
| Curator_confirmed | WBPerson1983 | ||||
| Remark | [090729 pad] New operon defined by SL1 and SL2 data as identified by RNAseq deep sequencing data produced by Hillier L. et al. | Person_evidence | WBPerson71 | ||
| From_analysis | modENCODE_Waterston_RNAseq | ||||
| [110322 pad] This operon has been re-assesed based on the modENCODE Waterston RNASeq data. The number of SL2 reads for each downstream gene in these operons does not achieve the 5% cutoff so has been removed from the operon set. | Person_evidence | WBPerson71 | |||
| Curator_confirmed | WBPerson1983 | ||||
| From_analysis | RNASeq_Hillier_elegans |
