WormBase Tree Display for Gene: WBGene00052866

WBGene00052866 SMap: S_parent: Sequence: Crem_Contig13
  Identity: Version: 3
    Name: CGC_name: Cre-dct-17.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE05627
      Molecular_name: CRE05627
        CRE05627.1
        RP07082
      Other_name: cr01.sctg1.wum.731
      Public_name: Cre-dct-17.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:38 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE05627
                Other_name: cr01.sctg1.wum.731
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-dct-17.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dct
    RNASeq_FPKM: WBls:0000004 0.020531 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.041061 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (36)
      WBls:0000027 1.83768 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.00208 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        2.04323 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        2.08438 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.26425 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.607748 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.93883 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        1.97745 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.38578 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.616427 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.73205 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.764763 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.80462 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.844477 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.854626 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.06784 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.1022 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 0.35331 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        0.506361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        0.531208 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.556055 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.574686 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.679166 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        1.19365 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.22232 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        1.236 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
      WBls:0000101 0.705608 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.930721 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (40)
    Paralog (30)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: CUB-like domain. Is an ortholog of C. elegans dct-17. In C. elegans, dct-17 is involved in defense response to Gram-negative bacterium and innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE05627
    Corresponding_transcript: CRE05627.1
    Other_sequence: CJC00920_1
  Experimental_info: Expr_pattern: Expr1112859
    Microarray_results: GPL14146_CRE05627_1258-1317_0.788_174_A
  Method: Gene