WormBase Tree Display for Gene: WBGene00009227

WBGene00009227 SMap: S_parent: Sequence: F28G4
  Identity: Version: 1
    Name: Sequence_name: F28G4.2
      Molecular_name: F28G4.2
        F28G4.2.1
        CE15920
      Other_name: CELE_F28G4.2 Accession_evidence: NDB BX284605
      Public_name: F28G4.2
    DB_info: Database: AceView gene 5Q760
        WormQTL gene WBGene00009227
        WormFlux gene WBGene00009227
        NDB locus_tag CELE_F28G4.2
        Panther gene CAEEL|WormBase=WBGene00009227|UniProtKB=O17852
          family PTHR31967
        NCBI gene 185080
        RefSeq protein NM_074709.3
        TREEFAM TREEFAM_ID TF315382
        TrEMBL UniProtAcc O17852
        UniProt_GCRP UniProtAcc O17852
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (109)
    RNASeq_FPKM (74)
    GO_annotation: 00030843
      00030844
    Ortholog (30)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable transferase activity. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F28G4.2
    Corresponding_transcript: F28G4.2.1
    Other_sequence: CBC01587_1
    Associated_feature: WBsf653481
      WBsf1002413
      WBsf1002414
      WBsf1021108
      WBsf235133
  Experimental_info: RNAi_result: WBRNAi00031541 Inferred_automatically: RNAi_primary
      WBRNAi00045861 Inferred_automatically: RNAi_primary
      WBRNAi00014069 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027026
      Expr1034028
      Expr1149766
      Expr2003116
      Expr2021330
    Drives_construct: WBCnstr00032358
    Construct_product: WBCnstr00032358
    Microarray_results (16)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038061:aldicarb_downregulated
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045017:blmp-1(tm548)_downregulated
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049732:blmp-1(tm548)_vs_N2_downregulated
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050801:SET-4_dauer_regulome
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055944:C.butyricum_vs_OP50_downregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L3
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:Seam_cell
      WBPaper00061340:T
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061527:C38C6.3-acdh-6
      WBPaper00061699:daf-18(ok480)_downregulated
      WBPaper00061952:daf-18(yh1)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062347:blmp-1(tm548)_downregulated
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:0_0
      WBPaper00065984:pals-17(syb3980)_downregulated
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035084:L2_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_I
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045294:50uM_TBBP_downregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00051387:Triclosan_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction (16)
  Map_info: Positive: Positive_clone: F28G4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 9.93161
  Reference: WBPaper00065080
  Method: Gene