WormBase Tree Display for CDS: F28G4.2
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| F28G4.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F28G4 | |||
| Structure | Source_exons | 1 | 75 | |||
| 123 | 194 | |||||
| 248 | 337 | |||||
| 403 | 684 | |||||
| 749 | 928 | |||||
| 1153 | 1424 | |||||
| 1476 | 1629 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O17852 | ||
| UniProt | UniProtAcc | O17852 | ||||
| UniProt_GCRP | UniProtAcc | O17852 | ||||
| AlphaFold | entry | O17852 | ||||
| NCBI_protein | GI_number | GI:3876518 | ||||
| TREEFAM | TREEFAM_ID | TF315382 | ||||
| Protein_id | CHROMOSOME_V | CAB07605 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03407 (Nucleotide-diphospho-sugar transferase); contains similarity to Interpro domain IPR005069 (Nucleotide-diphospho-sugar transferase) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00009227 | ||||
| Corresponding_transcript | F28G4.2.1 | |||||
| Corresponding_protein | CE15920 | |||||
| Corresponding_PCR_product | cenix:124-c5 | |||||
| mv_F28G4.2 | ||||||
| sjj_F28G4.2 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | L1_Nanopore_Li_312208 | Inferred_automatically | transcript_builder.pl | |||
| EC013138 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF179H10_1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG1015|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG1015|c2_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_360095 | Inferred_automatically | transcript_builder.pl | ||||
| EB997685 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG1015|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR179H10_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00031541 | |||||
| WBRNAi00045861 | ||||||
| WBRNAi00014069 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Nucleotide-diphospho-sugar transferase domain-containing protein | Accession_evidence | UniProt | TR:O17852 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
